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Protein Alignment CG42397 and CG43896

DIOPT Version :10

Sequence 1:	NP_001163428.1	Gene:	CG42397 / 8673976	FlyBaseID:	FBgn0259748	Length:	178	Species:	Drosophila melanogaster
Sequence 2:	NP_001261732.1	Gene:	CG43896 / 39360	FlyBaseID:	FBgn0264488	Length:	2113	Species:	Drosophila melanogaster

Alignment Length:	159	Identity:	44/159 - (27%)
Similarity:	69/159 - (43%)	Gaps:	28/159 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly    17 VSGSTSSGEDTNIKLTTDESTTVEDTTEVLVTTLPPPVLCADEDL----FLP-APDCREYYQCLY 76
            |.|:.::....:...||...:..|:|||       ||..|...|:    |:| ..:||:|:.|:.
  Fly   256 VPGTCTTESPCDDSTTTTTESCAEETTE-------PPASCDCGDIKNADFIPDEENCRKYFICID 313

  Fly    77 GEGILKICPDGLYWDRELNVCAWDSQH--CADDKNETTTPSTLNCASGLPFL-PYIPDCTKFIQC 138
            |..:...|..|..::..|:||..|:.:  |..|           |..|...: |  .||||:.:|
  Fly   314 GVLVAADCGKGNVFNANLSVCEVDADNTCCVAD-----------CTDGEAKVDP--QDCTKYFKC 365

  Fly   139 VYNIGFKLSCPSGLYWNQPLQSCDYTCDN 167
            .......:||.||.|:|:.|..|....:|
  Fly   366 QSGDWTSVSCDSGSYFNETLNCCQVDVNN 394

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.