DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42397 and obst-G

DIOPT Version :10

Sequence 1:NP_001163428.1 Gene:CG42397 / 8673976 FlyBaseID:FBgn0259748 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_648529.1 Gene:obst-G / 39355 FlyBaseID:FBgn0036228 Length:279 Species:Drosophila melanogaster


Alignment Length:157 Identity:44/157 - (28%)
Similarity:69/157 - (43%) Gaps:13/157 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SGSTSSGEDTNIKLTTDESTTVEDTTEVLVTTLPPPVLCA---DEDLFLPAPDCREYYQCLYGEG 79
            |.|.|..:|......||...||:.|.:...|||..  :||   |..:......|:|||.|...:.
  Fly    96 SSSESDEDDDEEMAKTDPPVTVKATKKPRPTTLDK--MCAGKKDGVMLTKNGSCQEYYVCKAKKP 158

  Fly    80 ILKICPDGLYWDRELNVCAWDSQ-HCAD---DKNETTTPSTLN--CASGL--PFLPYIPDCTKFI 136
            .|:.|||..::.....:|...|: .|:.   :..|:..|:|..  |:...  ..:.:..||.||:
  Fly   159 HLRSCPDKQHFSPTRRICMKASEAKCSGGTRENKESDGPATTGGVCSDEKENSLVAHRSDCGKFM 223

  Fly   137 QCVYNIGFKLSCPSGLYWNQPLQSCDY 163
            .|...:...:.||:||::|.....|||
  Fly   224 LCSNMMFLVMDCPTGLHFNIATSRCDY 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42397NP_001163428.1 CBM_14 58..102 CDD:426342 11/43 (26%)
ChtBD2 125..163 CDD:214696 11/37 (30%)
obst-GNP_648529.1 CBM_14 32..83 CDD:426342
CBM_14 132..184 CDD:426342 14/51 (27%)
CBM_14 204..256 CDD:426342 14/47 (30%)
Blue background indicates that the domain is not in the aligned region.

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