DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42397 and obst-E

DIOPT Version :10

Sequence 1:NP_001163428.1 Gene:CG42397 / 8673976 FlyBaseID:FBgn0259748 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_723116.1 Gene:obst-E / 33806 FlyBaseID:FBgn0031737 Length:249 Species:Drosophila melanogaster


Alignment Length:124 Identity:32/124 - (25%)
Similarity:47/124 - (37%) Gaps:14/124 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 FLPAPDCREYYQCLYGEGILKICPDGLYWDRELNV---CAW-DSQHCADDKNETTTPSTLNCASG 122
            |.....|..|.:|..|..:.|:|||||.:.:....   |.: ....|.:.........|..|...
  Fly    32 FASGDQCDSYTECQDGTPVEKLCPDGLLFHQRTKATGECTYAPYSTCKERARLQPANGTEECPRQ 96

  Fly   123 LPFLPYIPDCTK---FIQCVYNIGFKLSCPSGLYWNQPLQSCDY-----TCDNAIEFSG 173
            ..|.|. .|.||   :..|.:.:.....||.||.:|:....||:     :| ||..:.|
  Fly    97 FGFYPN-GDATKCGVYRNCAHGVASLTKCPEGLAFNEETYQCDWPDLVESC-NAEAYLG 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42397NP_001163428.1 CBM_14 58..102 CDD:426342 12/43 (28%)
ChtBD2 125..163 CDD:214696 12/40 (30%)
obst-ENP_723116.1 ChtBD2 23..65 CDD:214696 11/32 (34%)
CBM_14 95..146 CDD:426342 13/51 (25%)
CBM_14 180..225 CDD:426342
Blue background indicates that the domain is not in the aligned region.

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