DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42397 and obst-A

DIOPT Version :10

Sequence 1:NP_001163428.1 Gene:CG42397 / 8673976 FlyBaseID:FBgn0259748 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_608378.2 Gene:obst-A / 33022 FlyBaseID:FBgn0031097 Length:237 Species:Drosophila melanogaster


Alignment Length:153 Identity:37/153 - (24%)
Similarity:52/153 - (33%) Gaps:44/153 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 EDTTEVLVTTLPPP---VLCADEDLFLPAPD---CREYYQCLYGEGILKICPDGLYWDRELNVCA 98
            ||.||     |..|   ..|..::.|...||   |..:|.|:.|:.:...|..||::|.....|.
  Fly    79 EDRTE-----LQEPKSSKYCPRKNGFFAHPDPAVCNIFYNCIEGDALETKCTVGLHFDEYSGTCV 138

  Fly    99 W-----------------------DSQHCADDKNETTTPSTLNCASGLPFLPYIPDCTKFIQCVY 140
            |                       ..|...||:.:..|.         |..|:..||.||..|:.
  Fly   139 WPDTAKREGCNPEQRTSETGFVCPKDQPKTDDRGQVVTH---------PKYPHPTDCQKFYVCLN 194

  Fly   141 NIGFK-LSCPSGLYWNQPLQSCD 162
            ....: |.|..|..:|...:.||
  Fly   195 GEDPRDLGCQLGEVYNDATEMCD 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42397NP_001163428.1 CBM_14 58..102 CDD:426342 13/69 (19%)
ChtBD2 125..163 CDD:214696 12/39 (31%)
obst-ANP_608378.2 CBM_14 27..77 CDD:426342
CBM_14 95..143 CDD:426342 13/47 (28%)
CBM_14 180..225 CDD:426342 12/38 (32%)
Blue background indicates that the domain is not in the aligned region.

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