DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42397 and LOC3290701

DIOPT Version :10

Sequence 1:NP_001163428.1 Gene:CG42397 / 8673976 FlyBaseID:FBgn0259748 Length:178 Species:Drosophila melanogaster
Sequence 2:XP_061499387.1 Gene:LOC3290701 / 3290701 VectorBaseID:AGAMI1_010001 Length:263 Species:Anopheles gambiae


Alignment Length:162 Identity:40/162 - (24%)
Similarity:57/162 - (35%) Gaps:35/162 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLGLFALLVSGSTSSGEDTNIKLTTDESTTVEDTTEVLVTTLPPPVLCADEDLFLPAPDCREYYQ 73
            |..|...|.||.....||.    ...:|..|.|.|.                       |..|::
Mosquito    15 LAALVIGLASGQRQDQEDP----CKTKSKVVGDVTY-----------------------CDRYWE 52

  Fly    74 CLYGEGILKICPDGL-YWDRELNV---C--AWDSQHCADDKNETTTP-STLNCASGLPFLPYIPD 131
            |:..:..|..||:|| :..:...|   |  .|.|.:| |.|.....| ||.:|........:...
Mosquito    53 CINNQPELYDCPNGLVFAGKHRGVTEGCDYPWRSNYC-DGKQLANGPISTEHCDWLYGIFGHETS 116

  Fly   132 CTKFIQCVYNIGFKLSCPSGLYWNQPLQSCDY 163
            ||::..|......:..|..||.:|:...|||:
Mosquito   117 CTRYWTCWNGTATEQLCIGGLLYNENAHSCDW 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42397NP_001163428.1 CBM_14 58..102 CDD:426342 11/49 (22%)
ChtBD2 125..163 CDD:214696 9/37 (24%)
LOC3290701XP_061499387.1 None

Return to query results.
Submit another query.