DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42397 and cbd-1

DIOPT Version :10

Sequence 1:NP_001163428.1 Gene:CG42397 / 8673976 FlyBaseID:FBgn0259748 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_502145.2 Gene:cbd-1 / 178061 WormBaseID:WBGene00010351 Length:1319 Species:Caenorhabditis elegans


Alignment Length:183 Identity:39/183 - (21%)
Similarity:60/183 - (32%) Gaps:77/183 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 CADEDLF-----LP---APDCR-------------------------------EYYQCLYGEGIL 81
            |:|:.:|     :|   :|:||                               ::..|:.|...:
 Worm    61 CSDDSVFYEDECVPVDESPECRVDENTEEDDTPYAEFDCTSKQDGIYSIGCSNQFISCVAGGAYM 125

  Fly    82 KICPDGLYWDRELNVCAWDSQHCADDKNETTT--------------------------PST---- 116
            ..|||.|.::.....|   .:.|.:.|.:|||                          ||.    
 Worm   126 AKCPDSLVFNERTQDC---RESCDEVKQDTTTAPQVYEDGEEGYGEASGEIAGDYERQPSNEQPD 187

  Fly   117 ---LNCASGLPFLPYIPDCTK-FIQCVYNIGFKLSCPSGLYWNQPLQSCDYTC 165
               .:| :||....|...|.. |..|..|:.|:..||.|..:|...||||:.|
 Worm   188 SIDFDC-NGLEDGNYADGCNDVFYSCSNNMVFQRYCPPGTVFNINQQSCDFQC 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42397NP_001163428.1 CBM_14 58..102 CDD:426342 13/82 (16%)
ChtBD2 125..163 CDD:214696 13/38 (34%)
cbd-1NP_502145.2 ChtBD2 97..141 CDD:214696 6/43 (14%)
ChtBD2 191..237 CDD:214696 16/46 (35%)
CBM_14 692..743 CDD:426342
CBM_14 785..836 CDD:426342
CBM_14 1108..1161 CDD:426342
CBM_14 1182..1235 CDD:426342
CBM_14 1251..1296 CDD:426342
Blue background indicates that the domain is not in the aligned region.

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