Protein Alignment Skadu and HP1c

DIOPT Version :10

• Sequence 1: NP_001162985.1
• Gene: Skadu / 8673966
• FlyBaseID: FBgn0259922
• Length: 133
• Species: Drosophila melanogaster
• Sequence 2: NP_651093.1
• Gene: HP1c / 42696
• FlyBaseID: FBgn0039019
• Length: 237
• Species: Drosophila melanogaster
• Alignment Length: 104
• Identity: 18/104 - (17%)
• Similarity: 45/104 - (43%)
• Gaps: 8/104 - (7%)

  Fly    15 DNRHSDKRTCNLSTISPR--STLVQTVKKPVKKFSSDLANLPPVPAIDAFERGYQVESILDMVQN 77
            ||....:..|:...:..:  .:..::.|:..||     .....:..:..:|||.::..|:.....
  Fly    37 DNTWEPEENCDCPNLIQKFEESRAKSKKRGEKK-----PKCEEIQKLRGYERGLELAEIVGATDV 96

  Fly    78 IHKEQFLYIKFTNLIEPELVPLELALQHVPHLLSDFYKE 116
            ....::| :::....|.:|||....::..|.:|.|::::
  Fly    97 TGDIKYL-VRWQFCDEFDLVPSAQIVEKDPQMLIDYFQK 134

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Skadu	NP_001162985.1	CSD	66..116	CDD:349275	9/49 (18%)
HP1c	NP_651093.1	CD_CSD	8..55	CDD:475127	3/17 (18%)
		CSD	85..135	CDD:349275	9/51 (18%)