DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42638 and Mcoln1

DIOPT Version :9

Sequence 1:NP_001163472.1 Gene:CG42638 / 8673965 FlyBaseID:FBgn0261361 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_444407.1 Gene:Mcoln1 / 94178 MGIID:1890498 Length:580 Species:Mus musculus


Alignment Length:605 Identity:226/605 - (37%)
Similarity:341/605 - (56%) Gaps:82/605 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 VVPMPISAGSGTAPPSVDGREEQPEFPGSSAASYQEERMRRKLQFFFMNPIEKWQAKRKFPYKFV 121
            :.|.|   |.||..    |....|..|      .:||.:||:|::|||:|.:|::||.:.|.|.:
Mouse    16 LTPNP---GYGTQV----GTSPAPTTP------TEEEDLRRRLKYFFMSPCDKFRAKGRKPCKLM 67

  Fly   122 VQIVKIFLVTMQLCLFAHSRYNHINYTGDNRFAFSHLFLRGW-DSSREVESYPPAVGPFALYLKS 185
            :|:|||.:||:||.||..|....:.:..:|..||.||||.|: |.|.:.         ||.|.:.
Mouse    68 LQVVKILVVTVQLILFGLSNQLVVTFREENTIAFRHLFLLGYSDGSDDT---------FAAYTQE 123

  Fly   186 EFFDTVQYAVNGYANVSR-SIGPYDY------PTPNNTMPPLKLCLQNYREGTIFGFNESYIFDP 243
            :.:..:.|||:.|..:.. |:|.|.|      |..|.:  .|.||.:.|..|.:...|:::..||
Mouse   124 QLYQAIFYAVDQYLILPEISLGRYAYVRGGGGPWANGS--ALALCQRYYHRGHVDPANDTFDIDP 186

  Fly   244 HIDEVCERL-----PPNVTT------IGVENYLRQRDVEVNFASLVSAQLTFKIKTVNFKA--NG 295
            .:...|.::     ||::.:      .|..:|   :::.:.|..|::..:.|::||:|.::  |.
Mouse   187 RVVTDCIQVDPPDRPPDIPSEDLDFLDGSASY---KNLTLKFHKLINVTIHFQLKTINLQSLINN 248

  Fly   296 GPLSAPDCFRFDISITFNNRDHDGQMLLSLDAEATRLKC-------HGATDFISDANFDSMLRSV 353
               ..|||:.|.|.|||:|:.|.|::.:.|:.:....:|       ||          |:..|.:
Mouse   249 ---EIPDCYTFSILITFDNKAHSGRIPIRLETKTHIQECKHPSVSRHG----------DNSFRLL 300

  Fly   354 LNIFVLLTCALSFALCTRALWRAYLLRCTTVNFFRSQFGKELSFDGRLEFVNFWYIMIIFNDVLL 418
            .::.|:|||:|||.||.|:|.|.:||:...|.|...:.|:|:|...||||||.|||:::.:|||.
Mouse   301 FDVVVILTCSLSFLLCARSLLRGFLLQNEFVVFMWRRRGREISLWERLEFVNGWYILLVTSDVLT 365

  Fly   419 IIGSALKEQIEGRYLVVDQWDTCSLFLGIGNLLVWFGVLRYLGFFKTYNVVILTLKKAAPKILRF 483
            |.|:.:|..||.:.|.  .:|.||:.||...||||.||:|||.||..||::|.||:.|.|.::||
Mouse   366 ISGTVMKIGIEAKNLA--SYDVCSILLGTSTLLVWVGVIRYLTFFHKYNILIATLRVALPSVMRF 428

  Fly   484 LIAALLIYAGFVFCGWLILGPYHMKFRSLATTSECLFALINGDDMFATFATLSSK---ATWLWWF 545
            .....:||.|:.||||::|||||:|||||:..|||||:||||||||.|||.:.::   ::.:|.|
Mouse   429 CCCVAVIYLGYCFCGWIVLGPYHVKFRSLSMVSECLFSLINGDDMFVTFAAMQAQQGHSSLVWLF 493

  Fly   546 CQIYLYSFISLYIYVVLSLFIAVIMDAYDTIKAYYKDGFPTTDLKAFVGTRTAEDISSGVFMTDL 610
            .|:||||||||:||:|||||||:|..||||||.....|...::|:|:: .:..:..:||.|    
Mouse   494 SQLYLYSFISLFIYMVLSLFIALITGAYDTIKHPGGTGTEKSELQAYI-EQCQDSPTSGKF---- 553

  Fly   611 DDFDQTSFLDVVKSICCCGR 630
                :..........|||||
Mouse   554 ----RRGSGSACSLFCCCGR 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42638NP_001163472.1 Ion_trans 403..578 CDD:278921 99/177 (56%)
Mcoln1NP_444407.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 8/34 (24%)
Dileucine motif, mediates targeting to lysosomes. /evidence=ECO:0000250|UniProtKB:Q9GZU1 11..16 226/605 (37%)
Interaction with phosphoinositides. /evidence=ECO:0000269|PubMed:29019981 42..62 10/19 (53%)
Extracellular/lumenal pore loop. /evidence=ECO:0000250|UniProtKB:Q9GZU1 107..121 5/22 (23%)
ELD_TRPML1 112..292 CDD:410966 47/196 (24%)
PKD_channel <388..524 CDD:400395 79/135 (59%)
Selectivity filter. /evidence=ECO:0000269|PubMed:29019981 469..474 4/4 (100%)
Required for palmitoylation and association with membranes. /evidence=ECO:0000250|UniProtKB:Q9GZU1 565..567 1/1 (100%)
Dileucine internalization motif, mediates AP2 complex-dependent internalization. /evidence=ECO:0000250|UniProtKB:Q9GZU1 573..578
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846807
Domainoid 1 1.000 213 1.000 Domainoid score I2739
eggNOG 1 0.900 - - E1_KOG3733
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 418 1.000 Inparanoid score I1789
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49191
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001492
OrthoInspector 1 1.000 - - otm43480
orthoMCL 1 0.900 - - OOG6_102454
Panther 1 1.100 - - O PTHR12127
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3353
SonicParanoid 1 1.000 - - X949
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.790

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