DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42638 and mcoln1b

DIOPT Version :9

Sequence 1:NP_001163472.1 Gene:CG42638 / 8673965 FlyBaseID:FBgn0261361 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001373555.1 Gene:mcoln1b / 795916 ZFINID:ZDB-GENE-130514-1 Length:565 Species:Danio rerio


Alignment Length:598 Identity:223/598 - (37%)
Similarity:340/598 - (56%) Gaps:76/598 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 TPVAPVVPMPISAGSGTAPP----SVDGREEQPEFPGSSAASYQEERMRRKLQFFFMNPIEKWQA 112
            |||     |...:|.....|    |:..:::|.:         :||.:||||::|||:|.:|:.|
Zfish    21 TPV-----MGYGSGDLNGGPLDLCSLGSQQQQQD---------EEEALRRKLKYFFMSPCDKYHA 71

  Fly   113 KRKFPYKFVVQIVKIFLVTMQLCLFAHSRYNHINYTGDNRFAFSHLFLRGW-DSSREVESYPPAV 176
            |.:.|||..:|::||.:||:||.:|..|....:.:..:|..:|.|||||.: :.|:|        
Zfish    72 KGRKPYKLALQLLKIIIVTVQLVMFGLSNQMVVAFKEENTDSFKHLFLRDYVEDSQE-------- 128

  Fly   177 GPFALYLKSEFFDTVQYAVNGYANVSR-SIGPYDYPT---PNNTMPPLKLCLQNYREGTIFGFNE 237
             |..|:.:.:..:.::||::.|..:|: |:|.|.|..   ||::  .|.||.:.:::|||...|:
Zfish   129 -PLCLHTQKQVHEHIRYAIDQYLILSQTSVGRYAYVPGVGPNSS--ALYLCQRYFKKGTIDPVND 190

  Fly   238 SYIFDPHIDEVCERLPPNVTTIGVENYLRQRDVEVNFASLVSAQLTFKIKTVNFKA--NGGPLSA 300
            ::..|||:...|..:.|:..:..|::.  ..::.:||..||:..:.|::|.:|.:.  |.   ..
Zfish   191 TFDIDPHVITDCFGVNPSDPSSPVQDL--YPNITLNFQKLVNVTIEFQLKAINIQTIINN---EI 250

  Fly   301 PDCFRFDISITFNNRDHDGQMLLSLDAEATRLKC-------HGATDFISDANFDSMLRSVLNIFV 358
            |||:.|.|:|.|:|:.|.|::.|||..||...:|       ||          ||..|...::.|
Zfish   251 PDCYTFSITILFDNKAHSGKVKLSLLNEAFIKECRDPNVSGHG----------DSYARVAFDVLV 305

  Fly   359 LLTCALSFALCTRALWRAYLLRCTTVNFFRSQFGKELSFDGRLEFVNFWYIMIIFNDVLLIIGSA 423
            .:.|.||..||.|::.:..:|:...|.:||...|:.:|...||||:|.||:::|.:|||.||.|.
Zfish   306 AVVCGLSLVLCGRSILKGIMLQHELVCYFRVSLGRSVSLGDRLEFINGWYLLLIISDVLTIIASF 370

  Fly   424 LKEQIEGRYLVVDQWDTCSLFLGIGNLLVWFGVLRYLGFFKTYNVVILTLKKAAPKILRFLIAAL 488
            :|..||.:.|  ..:|.||:.:|...||||.||:||..||:.||::|:||:.|.|.::||...|.
Zfish   371 IKIAIETKNL--SSYDVCSILMGTSTLLVWVGVIRYFSFFQKYNILIVTLRAAFPNVIRFCCCAA 433

  Fly   489 LIYAGFVFCGWLILGPYHMKFRSLATTSECLFALINGDDMFATFATLSSKATWLWWFCQIYLYSF 553
            .||.|:.||||::|||||.|||||:|.|||||:|||||||||||:.:....|.:|.|.|||||:|
Zfish   434 AIYMGYCFCGWIVLGPYHAKFRSLSTVSECLFSLINGDDMFATFSEVEQSGTLVWVFSQIYLYTF 498

  Fly   554 ISLYIYVVLSLFIAVIMDAYDTIKAYYKDGFPTTDLKAFVGTRTAEDISSGVFMTDLDDFDQTSF 618
            |||:||:|||||||:|..|||||....:|....::|..|:...| :..:||            :|
Zfish   499 ISLFIYMVLSLFIALITGAYDTITQQTQDVPQVSELHRFIAECT-DTPTSG------------NF 550

  Fly   619 LDVVKSIC---CC 628
            .....|.|   ||
Zfish   551 RSPEPSTCSLFCC 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42638NP_001163472.1 Ion_trans 403..578 CDD:278921 100/174 (57%)
mcoln1bNP_001373555.1 ELD_TRPML 125..292 CDD:425394 51/182 (28%)
PKD_channel <388..521 CDD:400395 80/132 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592028
Domainoid 1 1.000 197 1.000 Domainoid score I3054
eggNOG 1 0.900 - - E1_KOG3733
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 383 1.000 Inparanoid score I2003
OMA 1 1.010 - - QHG49191
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001492
OrthoInspector 1 1.000 - - otm25448
orthoMCL 1 0.900 - - OOG6_102454
Panther 1 1.100 - - O PTHR12127
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3353
SonicParanoid 1 1.000 - - X949
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.790

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