DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42638 and mcoln1

DIOPT Version :9

Sequence 1:NP_001163472.1 Gene:CG42638 / 8673965 FlyBaseID:FBgn0261361 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001011347.1 Gene:mcoln1 / 496811 XenbaseID:XB-GENE-982338 Length:565 Species:Xenopus tropicalis


Alignment Length:591 Identity:215/591 - (36%)
Similarity:327/591 - (55%) Gaps:47/591 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LRRQVQLQSTPVAPVVPMPISAGSGTAPPSVDGREEQPEFPGSSAASYQEERMRRKLQFFFMNPI 107
            |||...|..:|...      |.......||.:......|||     |.:|.::||:|::|||:|.
 Frog     4 LRRSRSLSDSPKLS------SERRRLLSPSPNYGTRLCEFP-----SPEEVQLRRRLKYFFMSPC 57

  Fly   108 EKWQAKRKFPYKFVVQIVKIFLVTMQLCLFAHSRYNHINYTGDNRFAFSHLFLRGWDSSREVESY 172
            :|::||.:.|||..:|::||..||:||.||..|....:.:..:|..||.||||:.:....|    
 Frog    58 DKFRAKGRKPYKLGLQLLKIMFVTVQLILFGLSNQMVVQFKEENTEAFKHLFLKDYTDDAE---- 118

  Fly   173 PPAVGPFALYLKSEFFDTVQYAVNGYANVS-RSIGPYDYPTPNNTMPPLKLCLQNYREGTIFGFN 236
                ..:|:|.:.:.::.:.|||..|.::| ::...|.|..|.| ...|.:|.|.||:|.|...|
 Frog   119 ----KTYAVYTQEDVYEHLYYAVEQYFSLSNQTTARYAYTRPFN-QSALSVCQQYYRKGHIDPAN 178

  Fly   237 ESYIFDPHIDEVCERLPPNVTTIGVENYLRQRDVEVNFASLVSAQLTFKIKTVNFKA--NGGPLS 299
            :::..||.:...|..|.|...:...:|:      .:.|..|::..:.|::|.:|.:.  |.   .
 Frog   179 DTFNIDPQVITNCLFLDPAEPSQSYKNF------TIKFHKLINLTVQFQLKAINIQTIINN---E 234

  Fly   300 APDCFRFDISITFNNRDHDGQMLLSLDAEATRLKCHGATDFISDANFDSMLRSVLNIFVLLTCAL 364
            .|||:.|.|:|.|:|:.|.|::.:.||.||...:|...:.:   ...|:..|...::.|:|:|.|
 Frog   235 IPDCYTFTITILFDNKAHSGKVKIQLDNEAKIKECKDPSVY---GRGDNHSRLAFDVLVILSCIL 296

  Fly   365 SFALCTRALWRAYLLRCTTVNFFRSQFGKELSFDGRLEFVNFWYIMIIFNDVLLIIGSALKEQIE 429
            ||.||.|::.|..||:.....|...:.|..:|...||||||.||:::|.:|||.:.|:.:|..||
 Frog   297 SFILCARSIVRGLLLQHEFAQFVHYRHGLTISLSDRLEFVNGWYLLLIISDVLTVSGTVMKIGIE 361

  Fly   430 GRYLVVDQWDTCSLFLGIGNLLVWFGVLRYLGFFKTYNVVILTLKKAAPKILRFLIAALLIYAGF 494
            .:...  .:|.||:.||...||||.||:|||.||:.||::|:||:.|.|.::||.....:||.|:
 Frog   362 SKTFA--SYDVCSILLGTSTLLVWVGVIRYLSFFQKYNILIVTLRVALPNVIRFCCCVAVIYLGY 424

  Fly   495 VFCGWLILGPYHMKFRSLATTSECLFALINGDDMFATFATLSSKATWLWWFCQIYLYSFISLYIY 559
            .||||::|||||:|||:|:..|||||:||||||||.||:.:.:.:..:|.|.|:|||:||||:||
 Frog   425 CFCGWIVLGPYHVKFRTLSMVSECLFSLINGDDMFVTFSEMQNSSYLVWAFSQLYLYTFISLFIY 489

  Fly   560 VVLSLFIAVIMDAYDTIKAYYKDGFPTTDLKAFVG--TRTAEDISSGVFMTDLDDFDQTSFLDVV 622
            :|||||||:|..||:|||......|..::..|...  ....:..|||.|.:    .:.||    .
 Frog   490 MVLSLFIALITGAYETIKCQNSSDFSGSNDNALYQYIAECKDSPSSGKFRS----ANSTS----C 546

  Fly   623 KSICCC 628
            ...|||
 Frog   547 SMFCCC 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42638NP_001163472.1 Ion_trans 403..578 CDD:278921 93/174 (53%)
mcoln1NP_001011347.1 PKD_channel <297..506 CDD:369653 105/210 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 200 1.000 Domainoid score I2977
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 408 1.000 Inparanoid score I1835
OMA 1 1.010 - - QHG49191
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001492
OrthoInspector 1 1.000 - - otm48635
Panther 1 1.100 - - O PTHR12127
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3353
SonicParanoid 1 1.000 - - X949
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.100

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