DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42638 and Mcoln2

DIOPT Version :9

Sequence 1:NP_001163472.1 Gene:CG42638 / 8673965 FlyBaseID:FBgn0261361 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001034094.1 Gene:Mcoln2 / 292168 RGDID:1308884 Length:566 Species:Rattus norvegicus


Alignment Length:510 Identity:200/510 - (39%)
Similarity:310/510 - (60%) Gaps:23/510 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 QEERMRRKLQFFFMNPIEKWQAKRKFPYKFVVQIVKIFLVTMQLCLFAHSRYNHINYTGDNRFAF 155
            :||.:|..|:|:||:|.||::|:|:.|:|..:||:||.:||.||..|.......:.:..||..||
  Rat    37 KEECLREDLKFYFMSPCEKYRARRQIPWKLALQILKIVMVTTQLVRFGLGNQLVVAFKEDNTVAF 101

  Fly   156 SHLFLRGWDSSREVESYPPAVGPFALYLKSEFFDTVQYAVNGYANVSR-SIGPYDYPTPNNTMPP 219
            .||||:|: |..:.:.|     ..::|.:.:.::::.:|:..|.::.. |:....|....:....
  Rat   102 KHLFLKGF-SGVDEDDY-----SCSIYTQEDAYESIFFAIKQYRHLKNISLATLGYGKSEDNRTG 160

  Fly   220 LKLCLQNYREGTIFGFNESYIFDPHIDEVCERLPPNVTTIGVENYLRQRDVEVNFASLVSAQLTF 284
            |:.|.|:|:.|.:|..||:...|..|:..|..|...|.|...|::.:.....::|..||...::|
  Rat   161 LRFCKQHYKSGAMFSSNETLNIDSDIETDCTHLDLQVLTKDPEDWAQASFFRLDFHRLVQVDISF 225

  Fly   285 KIKTVNFKANGGPLSAPDCFRFDISITFNNRDHDGQMLLSLDAEATRLKCHGATDFISDANFD-S 348
            .:|.::.:|... ...|||:.|..:|||:|..|.|::.:..::||...:|       ...|.. |
  Rat   226 ALKGIDLQAVHS-REVPDCYLFQNTITFDNTAHSGKIKIYFNSEANIEEC-------KHMNLSGS 282

  Fly   349 MLRS-----VLNIFVLLTCALSFALCTRALWRAYLLRCTTVNFFRSQFGKELSFDGRLEFVNFWY 408
            :.||     |.::||:..|..|..||||::..|..||...:|||..::.:.:....|.||:|.||
  Rat   283 LQRSTRYVLVFDVFVIAICLASLILCTRSIVLALRLRKRFLNFFLEKYKQHVCDADRWEFINGWY 347

  Fly   409 IMIIFNDVLLIIGSALKEQIEGRYLVVDQWDTCSLFLGIGNLLVWFGVLRYLGFFKTYNVVILTL 473
            :::..:|::.||||.||.:|:.:.|.  .:|.||:.||...||||.||:||||:|:|||.:|||:
  Rat   348 VLVTISDLMTIIGSILKMEIKAKNLT--NYDLCSILLGTSTLLVWVGVIRYLGYFQTYNALILTM 410

  Fly   474 KKAAPKILRFLIAALLIYAGFVFCGWLILGPYHMKFRSLATTSECLFALINGDDMFATFATLSSK 538
            :.:.||:|||...|.|||.|:.||||::|||||.||.:|...:||||:|:||||||||||.:..|
  Rat   411 QASLPKVLRFSACAGLIYLGYTFCGWIVLGPYHEKFENLNIVAECLFSLVNGDDMFATFAQIQQK 475

  Fly   539 ATWLWWFCQIYLYSFISLYIYVVLSLFIAVIMDAYDTIKAYYKDGFPTTDLKAFV 593
            :..:|.|.::||||||||:||:|||||||:|.|:|.|||.|.::|||.|||:.|:
  Rat   476 SLLVWLFSRLYLYSFISLFIYMVLSLFIALITDSYHTIKKYQQNGFPETDLQKFL 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42638NP_001163472.1 Ion_trans 403..578 CDD:278921 97/174 (56%)
Mcoln2NP_001034094.1 PKD_channel <380..513 CDD:285288 79/132 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350334
Domainoid 1 1.000 212 1.000 Domainoid score I2686
eggNOG 1 0.900 - - E1_KOG3733
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 407 1.000 Inparanoid score I1828
OMA 1 1.010 - - QHG49191
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001492
OrthoInspector 1 1.000 - - otm45544
orthoMCL 1 0.900 - - OOG6_102454
Panther 1 1.100 - - O PTHR12127
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X949
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.760

Return to query results.
Submit another query.