DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42638 and Mcoln1

DIOPT Version :9

Sequence 1:NP_001163472.1 Gene:CG42638 / 8673965 FlyBaseID:FBgn0261361 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_006248816.1 Gene:Mcoln1 / 288371 RGDID:1308953 Length:620 Species:Rattus norvegicus


Alignment Length:639 Identity:230/639 - (35%)
Similarity:346/639 - (54%) Gaps:111/639 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 GSGT------APPSVDGREEQPEFP--------GSSAASY---QEERMRRKLQFFFMNPIEKWQA 112
            |||.      ||.|.....||...|        |:|.|..   :||.:||:|::|||:|.:|::|
  Rat     9 GSGERGRREGAPGSATSETEQLLTPNPGYGTQAGTSPAPTTPPEEEDLRRRLKYFFMSPCDKFRA 73

  Fly   113 KRKFPYKFVVQIVKIFLVTMQLCLFAHSRYNHINYTGDNRFAFSHLFLRGW-DSSREVESYPPAV 176
            |.:.|.|.::|:|||.:||:||.||..|....:.:..:|..||.||||.|: |.|.:.       
  Rat    74 KGRKPCKLMLQVVKILVVTVQLILFGLSNQLVVTFREENTIAFRHLFLLGYSDGSDDT------- 131

  Fly   177 GPFALYLKSEFFDTVQYAVNGYANVSR-SIGPYDY------PTPNNTMPPLKLCLQNYREGTIFG 234
              ||.|.:.:.:..:.|||:.|..:.. |:|.|.|      |..|.:  .|.||.:.|..|.:..
  Rat   132 --FAAYTREQLYQAIFYAVDQYLTLPEISLGRYAYVRGGGGPWANGS--ALALCQRYYHRGHVDP 192

  Fly   235 FNESYIFDPHIDEVCERL-----PPNVTT------IGVENYLRQRDVEVNFASLVSAQLTFKIKT 288
            .|:::..||.:...|.::     ||::.:      .|..:|   :::.:.|..|::..:.|::||
  Rat   193 ANDTFDIDPRVVTDCIQVDPPDRPPDIPSEDLDFLDGSTSY---KNITLKFHKLINVTIHFQLKT 254

  Fly   289 VNFKA--NGGPLSAPDCFRFDISITFNNRDHDGQMLLSLDAEATRLKC-------HGATDFISDA 344
            :|.::  |.   ..|||:.|.|.|||:|:.|.|::.:.|:.:....:|       ||        
  Rat   255 INLQSLINN---EIPDCYTFSILITFDNKAHSGRIPIRLETQTHIQECKHPSVSRHG-------- 308

  Fly   345 NFDSMLRSVLNIFVLLTCALSFALCTRALWRAYLLRCTTVNFFRSQFGKELSFDGRLEFVNFWYI 409
              |:..|.:.::.|:|||:|||.||.|:|.|.:||:...|.|...:.|:|:|...||||||.|||
  Rat   309 --DNSFRLLFDVVVILTCSLSFLLCARSLLRGFLLQNEFVVFMWRRRGREISLWERLEFVNGWYI 371

  Fly   410 MIIFNDVLLIIGSALKEQIEGRYLVVDQWDTCSLFLGIGNLLVWFGVLRYLGFFKTYN------- 467
            :::.:|||.|.|:.:|..||.:.|.  .:|.||:.||...||||.||:|||.||..||       
  Rat   372 LLVTSDVLTISGTIMKIGIEAKNLA--SYDVCSILLGTSTLLVWVGVIRYLTFFHKYNTHESLYQ 434

  Fly   468 ------------------VVILTLKKAAPKILRFLIAALLIYAGFVFCGWLILGPYHMKFRSLAT 514
                              ::|.||:.|.|.::||.....:||.|:.||||::|||||:|||||:.
  Rat   435 GRTTGACPYLPIQLSPAVILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGPYHVKFRSLSM 499

  Fly   515 TSECLFALINGDDMFATFATLSS---KATWLWWFCQIYLYSFISLYIYVVLSLFIAVIMDAYDTI 576
            .|||||:||||||||.|||.:.:   :::.:|.|.|:||||||||:||:|||||||:|..|||||
  Rat   500 VSECLFSLINGDDMFVTFAAMQAQQGRSSLVWLFSQLYLYSFISLFIYMVLSLFIALITGAYDTI 564

  Fly   577 KAYYKDGFPTTDLKAFVGTRTAEDISSGVFMTDLDDFDQTSFLDVVKSICCCGR 630
            |.....|...::|:|:: .:..:..:||.|        :.........:|||||
  Rat   565 KHPGGTGTEKSELQAYI-EQCQDSPTSGKF--------RRGSGSTCSLLCCCGR 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42638NP_001163472.1 Ion_trans 403..578 CDD:278921 99/202 (49%)
Mcoln1XP_006248816.1 PLN03223 <457..565 CDD:215637 64/107 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350336
Domainoid 1 1.000 212 1.000 Domainoid score I2686
eggNOG 1 0.900 - - E1_KOG3733
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 407 1.000 Inparanoid score I1828
OMA 1 1.010 - - QHG49191
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001492
OrthoInspector 1 1.000 - - otm45544
orthoMCL 1 0.900 - - OOG6_102454
Panther 1 1.100 - - O PTHR12127
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X949
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.800

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