DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42638 and mcoln3b

DIOPT Version :9

Sequence 1:NP_001163472.1 Gene:CG42638 / 8673965 FlyBaseID:FBgn0261361 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_021325744.1 Gene:mcoln3b / 100001113 ZFINID:ZDB-GENE-080225-25 Length:574 Species:Danio rerio


Alignment Length:578 Identity:213/578 - (36%)
Similarity:328/578 - (56%) Gaps:47/578 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 DGREE-----QPEFPGSSAASYQE---ERMRRKLQFFFMNPIEKWQAKRKFPYKFVVQIVKIFLV 130
            |.||:     .|....|...::.:   |..||||::|||||.:|::|:::.|:|..:|||||.:|
Zfish     3 DSREDYLCINDPNGNWSECEAHVDPALEAFRRKLKYFFMNPCDKYKARQRKPWKLFLQIVKIAVV 67

  Fly   131 TMQLCLFAHSRYNHINYTGDNRFAFSHLFLRGWDSSREVESYPPAVGPFALYLKSEFFDTVQYAV 195
            |:||..|..|....:.:..:|...|.||||:.:..|.        ...:|:|.:.:.:..:.:.|
Zfish    68 TVQLVSFGLSNQMVVQFKEENLLTFRHLFLKNYSESN--------TNTYAIYTQLDVYTHITHIV 124

  Fly   196 NGYANV-SRSIGPYDYPTPNNTMPPLKLCLQNYREGTIFGFNESYIFDPHIDEVCERL-PPNVTT 258
            ..:..: |.::|.::|....:...||.:|.|.|..|:|...||::..|..:|:.|..: |.:..|
Zfish   125 QQFLMLPSITVGNHEYEQEGDVYTPLCICQQFYHNGSISPANETFDIDSRVDQECSLIYPQDPFT 189

  Fly   259 IGVENYLRQRDVEVNFASLVSAQLTFKIKTVNFKANGGPLSAPDCFRFDISITFNNRDHDGQMLL 323
            ....|:      .::|..|:|..:.|.:|.:|.:..... ..|||:.|:|.|.|:|:.|.|::|:
Zfish   190 ESPLNF------TLHFERLLSVTVNFTLKAINLETVEYH-ELPDCYVFNIMIQFDNKAHSGRILV 247

  Fly   324 SLDAEATRLKCHGATDF-ISDANFDSMLRSVL-NIFVLLTCALSFALCTRALWRAYLLRCTTVNF 386
            .||.|....:|   :|: ::.|:..:|...|| :..|:|..:.|..||.|::....||:.....|
Zfish   248 DLDNEVHIYEC---SDWSMTGASARNMYMMVLFDAVVILILSTSLLLCIRSVKAGVLLQKEYSEF 309

  Fly   387 FRSQFGKELSFDGRLEFVNFWYIMIIFNDVLLIIGSALKEQIEGRYLVVDQWDTCSLFLGIGNLL 451
            ...::.|.:|...||||:|.||::||.:|||.|.||.||..|:.:  .|..:|.||:.||.|.:|
Zfish   310 SLRRYRKCVSLSERLEFINGWYLLIIVSDVLTISGSVLKIVIQLK--AVASYDLCSILLGTGTML 372

  Fly   452 VWFGVLRYLGFFKTYN----------VVILTLKKAAPKILRFLIAALLIYAGFVFCGWLILGPYH 506
            ||.|||||:|:.|.||          ::|:||:.|.|.::||...|.:||.|:.||||::|||||
Zfish   373 VWIGVLRYMGYLKKYNSMLCVCCVVQILIITLRVALPNVIRFTCCAAMIYLGYCFCGWIVLGPYH 437

  Fly   507 MKFRSLATTSECLFALINGDDMFATFATLSSKATWLWWFCQIYLYSFISLYIYVVLSLFIAVIMD 571
            .|||:|.|.||.||:|||||||||||..:..|:..:|.|.::|||:|:||:||:||||||.:|.|
Zfish   438 TKFRTLNTVSESLFSLINGDDMFATFKNMQQKSFVVWLFSRLYLYTFVSLFIYMVLSLFITLITD 502

  Fly   572 AYDTIKAYYKDGFPTTDLKAFVGTRTAEDI-SSGVFMTDLDDFDQTSFLDVVKSICCC 628
            .|||||....||.|.:||:|||  ...:|: .||.|  .::..:..|.....|.:|||
Zfish   503 TYDTIKHQQLDGEPVSDLQAFV--LQCKDLPDSGEF--SVEKTNSISSTGGGKLMCCC 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42638NP_001163472.1 Ion_trans 403..578 CDD:278921 97/184 (53%)
mcoln3bXP_021325744.1 PKD_channel <364..507 CDD:332708 76/142 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592027
Domainoid 1 1.000 197 1.000 Domainoid score I3054
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10118
Inparanoid 1 1.050 383 1.000 Inparanoid score I2003
OMA 1 1.010 - - QHG49191
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001492
OrthoInspector 1 1.000 - - otm25448
orthoMCL 1 0.900 - - OOG6_102454
Panther 1 1.100 - - LDO PTHR12127
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X949
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.900

Return to query results.
Submit another query.