DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42486 and Sfp33A3

DIOPT Version :10

Sequence 1:NP_001162960.1 Gene:CG42486 / 8673962 FlyBaseID:FBgn0259989 Length:77 Species:Drosophila melanogaster
Sequence 2:NP_001162959.1 Gene:Sfp33A3 / 8674115 FlyBaseID:FBgn0259964 Length:99 Species:Drosophila melanogaster


Alignment Length:187 Identity:36/187 - (19%)
Similarity:65/187 - (34%) Gaps:60/187 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LATDYSDVELFICSMAELAFVGNVFCG---GMALWSVYNS-FRQFIEQVIRLTKYLYRDHHPLQT 111
            |...:.::.||.|....::..|.:...   .:.|..|.|| .:..||:::.||.:|.|       
  Fly   701 LINSWCELLLFSCCYRSISTPGEIKISLGKSITLEQVKNSGLQTCIERMLNLTDHLRR------- 758

  Fly   112 VREQLLQFNHRIHRYTNRYCFSMMILIVFYLVAPVITSFGVYFQSVWQSHHDTNDTIRIWEISQV 176
                     .|:.||.             |:...||...             ::||..:.|..:|
  Fly   759 ---------LRVDRYE-------------YVAMKVIVLL-------------SSDTSELKESEKV 788

  Fly   177 APHRQFSLHMEQDFYGLQHRTNILHYTL------YIAVIVPMMFVTACTVHMKVLTI 227
            ...::.:|...|.:       .:.||..      .:.:.:|.:..| |.|..::|||
  Fly   789 RTSQEKALQALQAY-------TLAHYPKSPAKFGELLLRIPELQRT-CQVGKEMLTI 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42486NP_001162960.1 KAZAL_FS 27..71 CDD:412159 4/19 (21%)
Sfp33A3NP_001162959.1 KAZAL_FS 26..65 CDD:238052
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.