DRSC/TRiP Functional Genomics Resources

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Protein Alignment EIF3B and eIF3b

DIOPT Version :9

Sequence 1:NP_001032360.1 Gene:EIF3B / 8662 HGNCID:3280 Length:814 Species:Homo sapiens
Sequence 2:NP_611228.1 Gene:eIF3b / 36981 FlyBaseID:FBgn0034237 Length:690 Species:Drosophila melanogaster


Alignment Length:702 Identity:354/702 - (50%)
Similarity:478/702 - (68%) Gaps:32/702 - (4%)


- Green bases have known domain annotations that are detailed below.


Human   121 AQAVSEDAGGNEGRAAEAEPRALENGDADEPSFSDPEDFVDDVSEEELLGDVLKDRPQEADGIDS 185
            |:..||:..|.:...::.:         :||:|.||..|||::|:|:||||:|..||.||||::|
  Fly     2 AKKKSEEHSGTDANDSDYQ---------EEPNFDDPPGFVDNISDEDLLGDMLAQRPSEADGVES 57

Human   186 VIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYP-EEDGKTKGYIFLEYASPAHAVDAVKN 249
            |:||||:|:|.|.||||||.||:|:||.:|:|.|..|| :|:||||||.|:||.....|.:|||.
  Fly    58 VVVVDNIPKVEPVRLEKLKLVINKLFSNYGEIVNVVYPVDEEGKTKGYAFMEYKQARQAEEAVKK 122

Human   250 ADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEAECRDQYSVIFESGD 314
            .:.::|||.|||.|||||||.||..|.::|:.|..|.||...:|..::.:.:..|||.|..|:..
  Fly   123 LNNHRLDKNHTFAVNLFTDFQKYENIPEKWEPPTVQTFKVQSDLYNFINDPDTYDQYCVAAETAP 187

Human   315 RTSI--FWNDV-KDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGV 376
            ....  ||.:| .:|..:|.|.|:|:|:|:|||.|||:.|||:.|:|:|||..|::||:|.|.|.
  Fly   188 NCVQVGFWQNVLPEPFELETRERFTDTFVKWSPLGTYVVTFHKPGVAIWGGSSFQKIQKFPHPGT 252

Human   377 QLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKFFARM 441
            |.::|||||.||||:.|    ....|.||||||.||.:||.|..:..:...:|:||||.||.|||
  Fly   253 QFVEFSPCENYLVTYGP----TPTGQKIIIWDIRTGAEKRSFVADGMSVLSMFRWSHDDKFVARM 313

Human   442 TLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRV 506
            ..:::.||||||..|||.||:||.||:.|||||..|:||:||.|...||||||||::|.::|||.
  Fly   314 GENSIHIYETPSFYLLDLKSIKIPGIRGFSWSPTDNVIAYWVEEQNQIPARVTLMEIPKKREIRN 378

Human   507 RNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ----------GVVTNFEIFRMREKQVPVDVVEM 561
            :|||:|.||||||||:||||||||||..|..:          |:..|||||.||||::|||.||:
  Fly   379 KNLFHVADCKLHWQKSGDYLCVKVDRYSKLKKDKKDLDVKFLGMFYNFEIFHMREKEIPVDSVEI 443

Human   562 KETIIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLA 626
            :|.|:||||||.|:||:::|||....:||||.|....|..|:|..:|:....:||||:|||:|:|
  Fly   444 RELILAFAWEPVGNKFSIIHGETNSSNVSFYEVNKGVKPSLVKRLEKKSCTHLFWSPRGQFIVMA 508

Human   627 GLRSMNGALAFVD-TSDCTVMNIAEHYMASDVEWDPTGRYVVTSVSWWSHKVDNAYWLWTFQGRL 690
            .|..  |...||| |:|..:....:|:.||:||||||||||||.||.|..|.|..:.::|||||:
  Fly   509 NLTM--GTFEFVDSTNDYIITASPDHFRASEVEWDPTGRYVVTGVSSWKVKEDTGFNMYTFQGRI 571

Human   691 LQKNNKDRFCQLLWRPRPPTLLSQEQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTMME 755
            :::.....|.|.|||||||||||:|:.|:|||:||||...|||||||..::|||||:|:|..:.|
  Fly   572 IKRTILKNFVQFLWRPRPPTLLSEEKQKEIKKNLKKYYAAFEQKDRLRLTRASKELLEKRSQLRE 636

Human   756 DFRKYRKMAQELYMEQKNERLELRGGVDTDELDSNVDDWEEETIEFFVTEEI 807
            .|.:||......:.|||:.|:.|||.||||.|::  |:.:||.:||.|.||:
  Fly   637 TFMEYRNKRIAEWAEQKSRRIMLRGHVDTDNLET--DEVDEEIVEFLVKEEV 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EIF3BNP_001032360.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..158 9/36 (25%)
PRK07764 <4..161 CDD:236090 10/39 (26%)
Sufficient for interaction with EIF3E 124..413 139/292 (48%)
Sufficient for interaction with EIF3J 170..274 63/104 (61%)
RRM_eIF3B 184..264 CDD:409720 45/80 (56%)
COG5354 305..805 CDD:227657 265/513 (52%)
WD40 repeat 338..371 CDD:293791 19/32 (59%)
WD 3 366..425 28/58 (48%)
WD40 repeat 376..423 CDD:293791 23/46 (50%)
WD 4 426..489 36/62 (58%)
WD40 repeat 429..463 CDD:293791 21/33 (64%)
WD40 repeat 467..506 CDD:293791 23/38 (61%)
WD 5 490..553 43/72 (60%)
WD40 repeat 514..545 CDD:293791 21/40 (53%)
WD 6 554..598 24/43 (56%)
WD40 repeat 556..604 CDD:293791 25/47 (53%)
WD 7 599..642 19/43 (44%)
WD40 repeat 612..647 CDD:293791 16/35 (46%)
WD 8 643..685 20/41 (49%)
WD40 repeat 654..684 CDD:293791 19/29 (66%)
eIF3bNP_611228.1 WD40 <216..352 CDD:295369 75/139 (54%)
WD40 repeat 216..248 CDD:293791 18/31 (58%)
WD40 repeat 297..321 CDD:293791 10/23 (43%)
RRM_eIF3B 56..137 CDD:240724 45/80 (56%)
COG5354 194..690 CDD:227657 263/501 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156354
Domainoid 1 1.000 258 1.000 Domainoid score I2021
eggNOG 1 0.900 - - E1_COG5354
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2780
Inparanoid 1 1.050 703 1.000 Inparanoid score I669
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54076
OrthoDB 1 1.010 - - D1194797at2759
OrthoFinder 1 1.000 - - FOG0003562
OrthoInspector 1 1.000 - - oto89310
orthoMCL 1 0.900 - - OOG6_101924
Panther 1 1.100 - - LDO PTHR14068
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R377
SonicParanoid 1 1.000 - - X2436
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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