Sequence 1: | XP_016862877.1 | Gene: | CHRD / 8646 | HGNCID: | 1949 | Length: | 982 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259576.1 | Gene: | sog / 32498 | FlyBaseID: | FBgn0003463 | Length: | 1038 | Species: | Drosophila melanogaster |
Alignment Length: | 1062 | Identity: | 289/1062 - (27%) |
---|---|---|---|
Similarity: | 423/1062 - (39%) | Gaps: | 231/1062 - (21%) |
- Green bases have known domain annotations that are detailed below.
Human 11 LLLLGLLLL-------GSRPARGAGPEPPVLPIRSEKEPLPVR----GAAGCTFGGKVYALDETW 64
Human 65 HPDLGEPFGVMRCVLCACEA-PQWGRRTRGPGRVSCKNIKPECPTPACGQPRQLPGHCCQTCPQE 128
Human 129 RSSSERQPSGLSFEYPRDPEHRSYSDRGEPGAEERARGDGHTDFVALLTGPRS------------ 181
Human 182 ------QAVARARVSLLRSSLRFSI-SYRRLDRPTRIRFSDSNGSVLFEHPAAPT---------- 229
Human 230 QDGLVCGVWRAVPRLSLRLLRAEQLHVALVTLTHPSGE--VWGPLIRHRALAAETFSAILTLEGP 292
Human 293 -------PQ-QGVGGITLL-TLSDTEDSLHFLLLFRGLLEPRSGGKWDGGKTREKVRESTCLRKA 348
Human 349 HMCGLAGLTQVPLRLQILHQGQLLRELQANVSAQEPGFAEVLPNLTVQEMDWLVLGELQMALEWA 413
Human 414 GRPGLRISGHIAARKSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQV--VGTSSE 476
Human 477 VVAMTLETKPQRRDQRTVLCHMAGLQP--GGHTAVGICPGLGARGAHMLLQNELFLNVGTKDFPD 539
Human 540 GELRGHVAALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCHLHYEVLLAGLGGS 604
Human 605 EQGTVTAHLLGPP----GTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAKGMASLMITTKGSPR 665
Human 666 GELRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPG--LPALAPAKPGGPGRPRD 728
Human 729 ------PNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCPPPSCPHP---VQAPDQ 784
Human 785 CCPVCPEKQDVRDLPG----------LPRSRDPGEGCYFDGDRSWRAAGTRWHPVVPPFGLIKCA 839
Human 840 VCTCKGGTGEVHCEKVQCPRLACAQPVRVNPTD--CCKQCPVG----SGAH------PQL----- 887
Human 888 --------GDPMQADGPRGCRFAGQWFPESQSWHPSVPPFGEMSCITCRCGAGVPHCERDDCSLP 944
Human 945 LSCGSGKESRC--CSRCTAHRR 964 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CHRD | XP_016862877.1 | None | |||
sog | NP_001259576.1 | VWC | 102..174 | CDD:278520 | 36/74 (49%) |
CHRD | 200..334 | CDD:214804 | 41/133 (31%) | ||
CHRD | 341..467 | CDD:214804 | 36/152 (24%) | ||
CHRD | 473..585 | CDD:214804 | 29/120 (24%) | ||
CHRD | 594..708 | CDD:214804 | 35/116 (30%) | ||
VWC | 744..803 | CDD:278520 | 17/59 (29%) | ||
VWC | 832..898 | CDD:278520 | 24/67 (36%) | ||
VWC | 941..1017 | CDD:278520 | 22/68 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 92 | 1.000 | Domainoid score | I7623 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2774 | |
Inparanoid | 1 | 1.050 | 312 | 1.000 | Inparanoid score | I2587 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S7450 |
OMA | 1 | 1.010 | - | - | QHG49605 | |
OrthoDB | 1 | 1.010 | - | - | D289212at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0008063 | |
OrthoInspector | 1 | 1.000 | - | - | oto88748 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107806 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR46526 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X6013 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.930 |