DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RUNX3 and run

DIOPT Version :9

Sequence 1:NP_001026850.1 Gene:RUNX3 / 864 HGNCID:10473 Length:429 Species:Homo sapiens
Sequence 2:NP_001285501.1 Gene:run / 33059 FlyBaseID:FBgn0003300 Length:510 Species:Drosophila melanogaster


Alignment Length:497 Identity:159/497 - (31%)
Similarity:217/497 - (43%) Gaps:125/497 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    20 DPSTSRRFTPPSPAFPCGGGGGKMGENSGALSAQAAVGPGGRAR-PEVRSMVDVLA-------DH 76
            :|:.|...|....|...|.....:..|:.:.|:.|...|...|: |.  ||.|:.|       ::
  Fly    52 NPAQSLANTSTHSASSTGSSTPDLSTNNTSSSSNATTSPQNSAKMPS--SMTDMFASLHEMLQEY 114

Human    77 AGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAGNDENYSAELRNASAV 141
            .|||.:|.||:.|||.||:|||.||:||.||||:||.||||||:|::..||||||..||||.:..
  Fly   115 HGELAQTGSPSILCSALPNHWRSNKSLPGAFKVIALDDVPDGTLVSIKCGNDENYCGELRNCTTT 179

Human   142 MKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQTK 206
            ||||||:|||||||||||||||||||||:.|.|.|:|:|.:|||||||||||||    ..:....
  Fly   180 MKNQVAKFNDLRFVGRSGRGKSFTLTITIATYPVQIASYSKAIKVTVDGPREPR----SKQSYGY 240

Human   207 PFPDRF-----------------GDLERLRMRVTPS-----------------TPSPRGSLSTTS 237
            |.|..|                 |..:..|.:....                 :|:|..|::|:|
  Fly   241 PHPGAFNPFMLNPAWLDAAYMTYGYADYFRHQAAAQAAQVHHPALAKSSASSVSPNPNPSVATSS 305

Human   238 HFSSQPQ---------------------TPIQGTSELNPFSDPRQFDRSFPTLPTLTESRFPDPR 281
            ..:.||.                     :| .|.:...|::.|                :||...
  Fly   306 SSAVQPSEYPHPAAAVAAAAGQPAAMMPSP-PGAAPATPYAIP----------------QFPFNH 353

Human   282 MHYPGAMSAAFPYSATPSGTSISSLSVAGMPA-TSRFHHTYLPPPYPGAPQNQSGPFQANPSPYH 345
            :....|..||.|::..|    .:..:.||:.| .:..||...|.....|   .|.|..::|:..|
  Fly   354 VAAAAAAKAATPHAFHP----YNFAAAAGLRARNAALHHQSEPVHVSPA---SSRPSSSSPTQQH 411

Human   346 LYYGTSSGSYQFSMVAGSSSGGDR--------------------SPTRMLASCTSSAASVAAGNL 390
            :....::.....|:...|:|.||.                    :|.||  .|...|.|.     
  Fly   412 VLLKLNTSIETSSIHEQSASDGDSDDEQIDVVKSEFDLDKSLDVAPLRM--RCDLKAPSA----- 469

Human   391 MNPSLGGQSDGVEADGSHSNSP---TALSTPGRMDEAVWRPY 429
            |.|.......|..|: |...||   |.:.:.....:.|||||
  Fly   470 MKPLYHESGPGAVAN-SRQPSPETTTKIKSAAVQQKTVWRPY 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RUNX3NP_001026850.1 Runt 76..197 CDD:307137 86/120 (72%)
Atrophin-1 <191..325 CDD:331285 34/189 (18%)
RunxI 330..429 CDD:312115 26/121 (21%)
runNP_001285501.1 Runt 114..235 CDD:279225 86/124 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165142096
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3982
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5099
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
76.840

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