DRSC/TRiP Functional Genomics Resources

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Protein Alignment CBFA2T3 and Cbfa2t3

DIOPT Version :10

Sequence 1:NP_005178.4 Gene:CBFA2T3 / 863 HGNCID:1537 Length:653 Species:Homo sapiens
Sequence 2:NP_001101923.1 Gene:Cbfa2t3 / 361431 RGDID:1310547 Length:619 Species:Rattus norvegicus


Alignment Length:636 Identity:548/636 - (86%)
Similarity:573/636 - (90%) Gaps:21/636 - (3%)


- Green bases have known domain annotations that are detailed below.


Human    22 MSQTHPVLESGLLASAGCSAPRGPRKGGPAPVDRKAKASAMPDSPAEVKTQPRSTPPSMPPPPPA 86
            |||....||||.|    ...|||...|.||  .||.||:|||||||||||||||||||||||||.
  Rat     1 MSQASTTLESGAL----LPGPRGLHNGSPA--HRKEKAAAMPDSPAEVKTQPRSTPPSMPPPPPT 59

Human    87 ASQGATRPPSFTPHTHREDGPAT-LPHGRFHGCLKWSMVCLLMNGSSHSPTAINGAPCTPNGFSN 150
            :|||||||||||||||.|||||| |||||||||||||||||||||||||||||:|||.|||||||
  Rat    60 SSQGATRPPSFTPHTHGEDGPATSLPHGRFHGCLKWSMVCLLMNGSSHSPTAIHGAPSTPNGFSN 124

Human   151 GPATSSTASLSTQHLPPACGARQLSKLKRFLTTLQQFGSDISPEIGERVRTLVLGLVNSTLTIEE 215
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   125 GPATSSTASLSTQHLPPACGARQLSKLKRFLTTLQQFGSDISPEIGERVRTLVLGLVNSTLTIEE 189

Human   216 FHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQTPAQYLAQHEQLLLDASASSPIDS 280
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||:||
  Rat   190 FHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQTPAQYLAQHEQLLLDASATSPVDS 254

Human   281 SELLLEVNENGKRRTPDRTKENGSDRDPLHPEHLSKRPCTLNPAQRYSPSNGPPQPT--PPPHYR 343
            |||||||||||||:|||||||||||||||||:|||||.|||:||||.|||||.|.||  ||||||
  Rat   255 SELLLEVNENGKRKTPDRTKENGSDRDPLHPDHLSKRSCTLSPAQRCSPSNGLPHPTPPPPPHYR 319

Human   344 LEDIAMAHHFRDAYRHPDPRELRERHRPLVVPGSRQEEVIDHKLTEREWAEEWKHLNNLLNCIMD 408
            |||:||||||||:||||||||||||||||.:|||||||||||:||||||||||||||:|||||||
  Rat   320 LEDMAMAHHFRDSYRHPDPRELRERHRPLAIPGSRQEEVIDHRLTEREWAEEWKHLNSLLNCIMD 384

Human   409 MVEKTRRSLTVLRRCQEADREELNHWARRYSDAEDTKKGPAPAAARPRSSSAGPEGPQLDVPREF 473
            |.||||||||||||||||||||||||.|.|||:|:.||||.|.:||..:|.:|.||.||||.|:|
  Rat   385 MAEKTRRSLTVLRRCQEADREELNHWIRCYSDSEEGKKGPTPISARSLNSCSGSEGSQLDVHRDF 449

Human   474 LPRTLTGYVPEDIWRKAEEAVNEVKRQAMSELQKAVSDAERKAHELITTERAKMERALAEAKRQA 538
            .||||:||:||:|||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   450 TPRTLSGYMPEEIWRKAEEAVNEVKRQAMSELQKAVSDAERKAHELITTERAKMERALAEAKRQA 514

Human   539 SEDALTVINQQEDSSESCWNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVV 603
            ||||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||.|.|
  Rat   515 SEDALTVINQQEDSSESCWNCGRKASETCSGCNAARYCGSFCQHKDWEKHHHVCGQSLQGPAAAV 579

Human   604 ADPVPGPPEAAHSLGPSLPVGAASPSEAGSAGPSRPGSPSPPGPLDT-VPR 653
            |||:||.|:|           .||||||||||||||.||.||.|||| |||
  Rat   580 ADPLPGQPDA-----------TASPSEAGSAGPSRPCSPGPPVPLDTAVPR 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CBFA2T3NP_005178.4 Interaction with ZBTB33. /evidence=ECO:0000269|PubMed:23251453 145..242 96/96 (100%)
TAFH 173..262 CDD:462195 88/88 (100%)
Interaction with HIF1A. /evidence=ECO:0000269|PubMed:25974097 176..268 91/91 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 284..342 50/59 (85%)
NHR2 379..445 CDD:430219 58/65 (89%)
Nervy homology region 2 (NHR2), essential for down-regulation of PFKFB3, PFKFB4 and PDK1 expression. /evidence=ECO:0000269|PubMed:23840896 394..412 15/17 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 434..472 21/37 (57%)
vATP-synt_E 482..>553 CDD:419987 68/70 (97%)
Nervy homology region 3 (NHR3), essential for down-regulation of PFKFB3, PFKFB4 and PDK1 expression. /evidence=ECO:0000269|PubMed:23840896 485..533 46/47 (98%)
Mediates interaction with PRKAR2A. /evidence=ECO:0000269|PubMed:11823486 485..506 19/20 (95%)
zf-MYND 556..592 CDD:460312 34/35 (97%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 603..653 31/50 (62%)
Mediates localization to the nucleus. /evidence=ECO:0000250 1..435 370/415 (89%)
Mediates interaction with PDE7A (in isoform 2) 1..430 365/410 (89%)
Required for nucleolar targeting (in isoform 1) 1..127 80/105 (76%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..109 62/86 (72%)
Cbfa2t3NP_001101923.1 TAFH 147..236 CDD:462195 88/88 (100%)
NHR2 355..421 CDD:430219 58/65 (89%)
NtpE 460..>514 CDD:441000 52/53 (98%)
zf-MYND 532..568 CDD:460312 34/35 (97%)

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