DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CDK13 and Cdk12

DIOPT Version :9

Sequence 1:XP_016868239.1 Gene:CDK13 / 8621 HGNCID:1733 Length:1542 Species:Homo sapiens
Sequence 2:NP_001262167.1 Gene:Cdk12 / 40385 FlyBaseID:FBgn0037093 Length:1157 Species:Drosophila melanogaster


Alignment Length:1145 Identity:434/1145 - (37%)
Similarity:573/1145 - (50%) Gaps:262/1145 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    90 KRLARGKRRAGGRQKRR-----------------------RGPRAGQEAEKRRVFSLPQPQQDGG 131
            |...:.|:::..|:|:|                       ..|.|..::.:|.|.:.|.......
  Fly   144 KHKHKSKKKSKKRKKKRAKSYSSIDSMSDNDINALLDRRYTPPTAPSKSNERTVSAAPSSFTPHN 208

Human   132 GGASSGGGVTPLVEYEDVSSQSEQGLLLGGASAATAATAAGG------TGGSGGS-------PAS 183
            ...||.....|.|...:.:|.     ..|.:|..||.:|.|.      |.....|       |:|
  Fly   209 LKESSSPATPPPVRRPNTNSN-----YYGESSLETANSALGSNLQVTVTNKQSISNRLRSPPPSS 268

Human   184 -SSGTQRRGEGSERRPRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSR-SRHSHSGEERAEVA 246
             |||...|...|.|.|.....||||..           |...||....|| ||:.:|..:....|
  Fly   269 RSSGNGPRFGNSPRTPPPSHYSSSGGG-----------GVGSGSVVRDSRSSRYVNSPHKEDVSA 322

Human   247 KSGSSSSSGGRRKSASATSSSSSSRK--------DR-----DSKAHRSRTKS------------S 286
            ...||...|.:.:.:.|.|||..:||        ||     .:..|:.|..|            |
  Fly   323 HHRSSHDHGYQGRYSGAGSSSHDTRKVKRLSPELDRYNHQPSTPPHKRRKFSDGREVGLGNFEHS 387

Human   287 KEPPSAYKEPPKAYREDKTEPKAYRRRRSLSPLGGRDDSPVSHRASQSLRSRKSPSPAGGGSS-- 349
            :.....|:.    |..|:     |.||.|.||            :.|..|||:|||  ||.||  
  Fly   388 RHHSGKYER----YSRDR-----YSRRSSRSP------------SVQHSRSRQSPS--GGLSSGS 429

Human   350 -----------PYSRRLPRSPSPYSRRRSPSYSRHSSYERGGD-VSPSPYSSSSWRRSRSPYSPV 402
                       .|...:..:||..:|    :..|.|.....|| .|.||.:||.:..| ||.|||
  Fly   430 NAFRHGGSHKHKYGTTVSSTPSHTTR----TSKRASGTGTSGDRYSRSPRTSSRYMES-SPPSPV 489

Human   403 LRRSGKSRS------RSPYSSRHSRSRSRHRLSRSRSRHSSISPSTLTLKSSLAAELNKNKKARA 461
                |.|.|      |||...:.:|..||.|...|.|..||.|.|    :|..:.:|   |..|.
  Fly   490 ----GASGSHHYHHRRSPRMRQRTRGDSRRRSPSSASSESSASRS----RSPTSRDL---KHKRE 543

Human   462 AEAARAAEAAKAAEATKAAEAAAKAAK------ASNTSTPTKG----NTETSASASQTNHVKDVK 516
            ....:.:|.:..||..|......||.|      ..|:::.:.|    |..:|:....|.:..|.:
  Fly   544 EYIKKISETSLFAELVKDRHKRQKALKEIIERQEENSNSNSNGALTINDNSSSVDGNTPNAADGR 608

Human   517 KIKIEHAP---SPSSGGTLKN--DKAKTKPPLQVTKVENNLIVDKATKKAVIVGKESKSAATKEE 576
            .     ||   :|::..|..|  ....:||.|.:    ||:.:......:|:    |..|:..:.
  Fly   609 S-----APGSGTPAAASTTSNGLQALGSKPDLDL----NNIPMPNKQNDSVV----SNPASNADV 660

Human   577 SVSLKEKTKP-LTPSIGAKEKEQHVALVTSTLPPLPLPPML-------------PEDKEADSLRG 627
            ..|:.:..:| |.|...|.:..    :...:|..|||||.:             .:.||:|....
  Fly   661 PDSVAQLKQPLLVPPFSASKNN----IKPKSLTSLPLPPGMNVLDLAGARSPSPGQKKESDEKNV 721

Human   628 NISVKAVKKEVEKKLRCLLADLPLPPELPGGDDLS------KSPE--EKKTATQLH--------S 676
            ..|..|.|.         :.:||:||.:||.::||      .|||  :......:|        :
  Fly   722 TSSGSANKS---------VLNLPMPPVIPGSEELSGDDDVIDSPEDFDAPAVGTVHGHGGGPGTT 777

Human   677 KRRPKICGPRYGETKEKDIDWGKRCVDKFDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRLDNE 741
            ::||.|...|  :::....|||:||||.|::|..||||||||||||||..|.:|||||||||::|
  Fly   778 RQRPVILNRR--DSRNNVRDWGERCVDVFEMIAQIGEGTYGQVYKARDHHTNDMVALKKVRLEHE 840

Human   742 KEGFPITAIREIKILRQLTHQSIINMKEIVTDKEDALDFKKDKGAFYLVFEYMDHDLMGLLESGL 806
            ||||||||:|||||||||.|::|:|:.||||||:||::|:||||:|||||||||||||||||||:
  Fly   841 KEGFPITAVREIKILRQLNHRNIVNLHEIVTDKQDAVEFRKDKGSFYLVFEYMDHDLMGLLESGM 905

Human   807 VHFNENHIKSFMRQLMEGLDYCHKKNFLHRDIKCSNILLNNRGQIKLADFGLARLYSSEESAWLM 871
            |.|||.:..|.|:||::||:||||||||||||||||||:||||::|||||||||||:::      
  Fly   906 VDFNEENNASIMKQLLDGLNYCHKKNFLHRDIKCSNILMNNRGKVKLADFGLARLYNAD------ 964

Human   872 LIWEKVIFIWRILLMQMSAGSFGDSSRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGE 936
                                   |..||||||||||||||||||||||||.|:||||||||||||
  Fly   965 -----------------------DRERPYTNKVITLWYRPPELLLGEERYGPSIDVWSCGCILGE 1006

Human   937 LFTKKPIFQANQELAQLELISRICGSPCPAVWPDVIKLPYFNTMKPKKQYRRKLREEFVFIPAAA 1001
            ||.|:|:||||.|:||||.||:|||||.|||||:|||||.|:|:|.||.:||:|||:|.|:||.|
  Fly  1007 LFVKRPLFQANAEMAQLETISKICGSPVPAVWPNVIKLPLFHTLKQKKTHRRRLREDFEFMPAPA 1071

Human  1002 LDLFDYMLALDPSKRCTAEQALQCEFLRDVEPSKMPPPDLPLWQDCHELWSKKRRRQKQMGMTDD 1066
            |||.|.||.|||.||.|||.||:..:||.:.|.:||.|.||.|||||||||||||||        
  Fly  1072 LDLLDKMLDLDPDKRITAEDALRSPWLRKINPDEMPTPQLPTWQDCHELWSKKRRRQ-------- 1128

Human  1067 VSTIKAPRKDLSLGLDDSRTNTPQGVLPSSQLKSQGSSNV 1106
                          :.:.:.:.|..|:.|::.:..|::.|
  Fly  1129 --------------MREQQESLPPTVIASTKYQQHGATMV 1154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDK13XP_016868239.1 None
Cdk12NP_001262167.1 STKc_CDK12 796..1098 CDD:270847 227/330 (69%)
S_TKc 804..1098 CDD:214567 221/322 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155034
Domainoid 1 1.000 465 1.000 Domainoid score I471
eggNOG 1 0.900 - - E1_KOG0600
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 590 1.000 Inparanoid score I992
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 1 1.000 - - FOG0000444
OrthoInspector 1 1.000 - - otm40905
orthoMCL 1 0.900 - - OOG6_101677
Panther 1 1.100 - - O PTHR24056
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R186
SonicParanoid 1 1.000 - - X546
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.790

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