DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CDK13 and Pitslre

DIOPT Version :9

Sequence 1:XP_016868239.1 Gene:CDK13 / 8621 HGNCID:1733 Length:1542 Species:Homo sapiens
Sequence 2:NP_649251.2 Gene:Pitslre / 40292 FlyBaseID:FBgn0016696 Length:952 Species:Drosophila melanogaster


Alignment Length:1130 Identity:272/1130 - (24%)
Similarity:428/1130 - (37%) Gaps:334/1130 - (29%)


- Green bases have known domain annotations that are detailed below.


Human   170 AAGGTGGSGGSPAS----SSGTQRRGEGSE-----RRPRRDRRSSSG--RSKERHREHRRRDGQR 223
            ::|...|...||..    |.|.:...||..     :.|:..|.|.||  |.|::|...|||..:|
  Fly     4 SSGSEDGQLRSPNDVHYHSRGEEDEHEGDADALYIQPPQASRESGSGPRREKKKHSRERRRHKER 68

Human   224 ---GGSEAS---------KSRSRHSHSGEERAEVAKSGSSSSSGGRRKSASATSSSSSSRKDRDS 276
               ||:..:         :||..|.|..:                |.:|::|.::.        :
  Fly    69 DDVGGAALALERDHRYDYRSREEHYHHHQ----------------RERSSNAAAAY--------A 109

Human   277 KAHRSRTKSSKEPPSAYKEP----PK-----------------AYREDKTEPKAYR--------- 311
            |.|........:||...::|    |.                 |.||..:.|..|.         
  Fly   110 KHHLGHAYHYPQPPQQQQQPLPPAPSYAAHHYHHHQHLSGARAAPREYHSYPSGYHSGSRHGDYP 174

Human   312 ----RRRSLSPLGGRDDSPVSHRASQSLRSR-----------------------KSPSPAGGGSS 349
                .|||......:|    :....|.||||                       :|....||...
  Fly   175 MEEPTRRSSKYAESKD----AESLEQDLRSRLLKKRHNYVKDYETEENYEHRVERSDRREGGRKE 235

Human   350 PYSRRLPRSPSPYSRR-------RSPSYSRHSSYERGGDVSPSPYSSSSWRRSRSPYSPVLRRSG 407
              ..|..||....:|.       .||....|..::...       ..|.||..    ..|:||..
  Fly   236 --RERTVRSTHKQNRHDRVIELLDSPEQEHHHQHQHKS-------HRSKWREE----VEVIRRKV 287

Human   408 KS-------RSRSPYSSRHSRSR---------SRHRLSRSRSRHS-SISPSTLTLKSSLAAELN- 454
            ..       |.:...:.|.||.|         :|..|.|.|:.|| ::||:|:.  :|:.|.|| 
  Fly   288 PEDLELLARREKLLAAERESRQRKQTAREELEARRELLRERNEHSDALSPTTVA--ASVTAGLNI 350

Human   455 ---------------KNKKARA--AEAARAAEAAKAAEATKAAEAAAKAAKASNTSTPTKGNTET 502
                           |.||.|.  .|..|..:..::.|:....|...:.::.|    .|:..:|.
  Fly   351 HVKRKSKPDNYEKEIKLKKRREDDIEVIRDDDDEESEESDSNEEVPEQDSEGS----ATESGSED 411

Human   503 SASASQTNHVKDVKKIK--IEHAPSPSS----GGTLKNDKAKTKPPLQVTKVENNLIVDKATKKA 561
            |.::.:.:.:|...:::  .|..|.|.|    |...|:.|.:.:         :..:..|::.::
  Fly   412 SYASKKKSKIKSKSQLEDDDEDLPLPDSPLSVGELYKSPKQRQR---------SRSVSSKSSSQS 467

Human   562 VIVGK---ESKSAATKEESVSLKEKTKPLTPSIGAKEKEQHVALVTSTLPPLPLPPMLPEDKEAD 623
            ....:   .|:|.::.|:.|..::.....:||...:.:|:            .:....||:|..:
  Fly   468 SRSSRSRSRSRSQSSLEDEVDRQDVGADASPSSSTRSEER------------GMTQEQPEEKPEE 520

Human   624 SLRGNISVKAVKKEVEKKLRCLLADLPLPPELPGGDDLSKSPEEKKTATQLHSKRRPKICGPRYG 688
            .|      |..:|.:|:::.|....:|||...||..                             
  Fly   521 KL------KEKQKSLEEQIPCDDKGIPLPNYYPGVQ----------------------------- 550

Human   689 ETKEKDIDWGKRCVDKFDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRLDNEKEGFPITAIREI 753
                     |.|.|::|..:..|.|||||.||:|:||.|.|:||||:::::.||||||||::|||
  Fly   551 ---------GCRSVEEFQCLNRIEEGTYGVVYRAKDKRTNEIVALKRLKMEKEKEGFPITSLREI 606

Human   754 KILRQLTHQSIINMKEIVTDKEDALDFKKDKGAFYLVFEYMDHDLMGLLE---SGLVHFNENHIK 815
            ..|.:..|.:|:.::|||...      ..||  .::|.:|::|||..|:|   :....|....:|
  Fly   607 NTLLKGQHPNIVTVREIVVGS------NMDK--IFIVMDYVEHDLKSLMETMKNRKQSFFPGEVK 663

Human   816 SFMRQLMEGLDYCHKKNFLHRDIKCSNILLNNRGQIKLADFGLARLYSSEESAWLMLIWEKVIFI 880
            ...:||:..:.:.|....||||:|.||:||:::|.:|:.||||||.|                  
  Fly   664 CLTQQLLRAVAHLHDNWILHRDLKTSNLLLSHKGILKVGDFGLAREY------------------ 710

Human   881 WRILLMQMSAGSFGDSSRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQ 945
                         |...:.||:.|:|||||.|||||....|:..|||||.|||..|.....|:|.
  Fly   711 -------------GSPIKKYTSLVVTLWYRAPELLLCSPVYSTPIDVWSVGCIFAEFLQMLPLFP 762

Human   946 ANQELAQLELISRICGSPCPAVWPDVIKLPYFNTM---------KPKKQYRRKLREEFVFIPAAA 1001
            ...|:.:|..|.:..|:|...:||...:||....|         .|..|.|:..:|:   .....
  Fly   763 GKSEIDELNRIFKELGTPNEKIWPGYTELPAVKNMLSQNSQFTEYPVSQLRKHFQEK---TSEMG 824

Human  1002 LDLFDYMLALDPSKRCTAEQALQCEFLRDVEPSKMPPPDLPLWQDCHELWSKKRRRQKQMGMTDD 1066
            |.|...:|..||.:|.:|:.||:..|.::: |..:.|...|.|....||.::|            
  Fly   825 LSLLQGLLTYDPKQRLSADAALKHGFFKEL-PLPIDPSMFPTWPAKSELGARK------------ 876

Human  1067 VSTIKAPRKDLSLGLDDSRTNTPQGVLPSSQLKSQGSSNVAPVKTGPGQHLNHSELAILLNLLQS 1131
                             ::.::|:.....||.|..|...  |:..|||..|  |...|..|....
  Fly   877 -----------------AQASSPKPPSGGSQFKQLGRDE--PIIVGPGNKL--SSGIITGNKKSH 920

Human  1132 KTSVNMADFVQVLNIKVNSETQQQL 1156
            ....:.|....|||..:   ||:||
  Fly   921 GAGGSSASTGFVLNAGI---TQRQL 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDK13XP_016868239.1 None
PitslreNP_649251.2 STKc_CDC2L1 552..851 CDD:173741 118/340 (35%)
PLN00009 555..854 CDD:177649 118/340 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925637at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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