DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RUNX1T1 and runx1t1

DIOPT Version :10

Sequence 1:NP_001185608.1 Gene:RUNX1T1 / 862 HGNCID:1535 Length:663 Species:Homo sapiens
Sequence 2:XP_004915205.1 Gene:runx1t1 / 100491944 XenbaseID:XB-GENE-481238 Length:585 Species:Xenopus tropicalis


Alignment Length:575 Identity:557/575 - (96%)
Similarity:567/575 - (98%) Gaps:0/575 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    89 DRTEKHSTMPDSPVDVKTQSRLTPPTMPPPPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPP 153
            |||||..||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
 Frog    11 DRTEKRCTMPDSPVDVKTQSRLTPPTMPPPPTTQGGPRTSSFTPTTLTNGTSHSPTALNGAPSPP 75

Human   154 NGFSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLVNST 218
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog    76 NGFSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLVNST 140

Human   219 LTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQLLLDASTT 283
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   141 LTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQLLLDASTT 205

Human   284 SPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRYSPNNGLSYQPNGL 348
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||
 Frog   206 SPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRYSPNNGLSFQPNGL 270

Human   349 PHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGTRQEEMIDHRLTDREWAEEW 413
            |||||||||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||
 Frog   271 PHPTPPPPQHYRLDDMAIAHHYRDSYRHPNHRDLRDRNRPMGLHGTRQEEMIDHRLTDREWAEEW 335

Human   414 KHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRRYSDAEDLKKGGGSSSSHSRQQSPV 478
            |||||||||||||||||||||||||||||||||||||||||||||||||||..||||||||||||
 Frog   336 KHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRRYSDAEDLKKGSSSSSSHSRQQSPV 400

Human   479 NPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNEVKRQAMTELQKAVSEAERKAHDMITTERA 543
            ||:||.|::||||||||||||||||||||||||||||||||||||||||||||||||:|||||||
 Frog   401 NPEPVPLESHREFLHRPASGYVPEEIWKKAEEAVNEVKRQAMTELQKAVSEAERKAHEMITTERA 465

Human   544 KMERTVAEAKRQAAEDALAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHH 608
            ||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||||
 Frog   466 KMERTVAEAKRQAAEDALSVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHH 530

Human   609 ICGQTLQAQQQGDTPAVSSSVTPNSGAGSPMDTPPAATPRSTTPGTPSTIETTPR 663
            ||||||||||||:||||||||||:||||||:|||||||||||||||||||||..|
 Frog   531 ICGQTLQAQQQGETPAVSSSVTPSSGAGSPIDTPPAATPRSTTPGTPSTIETAAR 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RUNX1T1NP_001185608.1 TAFH 181..270 CDD:462195 88/88 (100%)
NHR2 396..462 CDD:430219 65/65 (100%)
NtpE 502..>556 CDD:441000 52/53 (98%)
zf-MYND 574..610 CDD:460312 35/35 (100%)
runx1t1XP_004915205.1 TAFH 103..192 CDD:462195 88/88 (100%)
NHR2 318..384 CDD:430219 65/65 (100%)
NtpE 424..>478 CDD:441000 52/53 (98%)
zf-MYND 496..532 CDD:460312 35/35 (100%)

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