DRSC/TRiP Functional Genomics Resources

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Protein Alignment RUNX1 and Runx1

DIOPT Version :10

Sequence 1:NP_001745.2 Gene:RUNX1 / 861 HGNCID:10471 Length:480 Species:Homo sapiens
Sequence 2:XP_017453542.1 Gene:Runx1 / 50662 RGDID:2283 Length:464 Species:Rattus norvegicus


Alignment Length:480 Identity:445/480 - (92%)
Similarity:450/480 - (93%) Gaps:16/480 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     1 MASDSIFESFPSYPQCFMRECILGMNPSRDVHDASTSRRFTPPSTALSPGKMSEALPLGAPDAGA 65
            |||||||||||||||||:|             ||||||||||||||||||||||||||||||.||
  Rat     1 MASDSIFESFPSYPQCFVR-------------DASTSRRFTPPSTALSPGKMSEALPLGAPDGGA 52

Human    66 ALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLV 130
            |||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    53 ALASKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLV 117

Human   131 TVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKI 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   118 TVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKI 182

Human   196 TVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFN 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   183 TVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFN 247

Human   261 PQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPISPGRASGMTTLSAELSSRLSTAP 325
            |||||||||.|||||||||||||||||||||.| |||||||||||||||||:|||||||||||||
  Rat   248 PQPQSQMQDARQIQPSPPWSYDQSYQYLGSITS-SVHPATPISPGRASGMTSLSAELSSRLSTAP 311

Human   326 DLTAFSDPRQFPALPSISDPRMHYPGAFTYSPTPVTSGIGIGMSAMGSATRYHTYLPPPYPGSSQ 390
            |||||.||||||.||||||||||||||||||| |||||||||||||.|.:|||||||||||||||
  Rat   312 DLTAFGDPRQFPTLPSISDPRMHYPGAFTYSP-PVTSGIGIGMSAMSSTSRYHTYLPPPYPGSSQ 375

Human   391 AQGGPFQASSPSYHLYYGASAGSYQFSMVGGERSPPRILPPCTNASTGSALLNPSLPNQSDVVEA 455
            ||.||||..|||||||||.|||||||||||||||||||||||||||||:||||||||:||||||.
  Rat   376 AQAGPFQTGSPSYHLYYGTSAGSYQFSMVGGERSPPRILPPCTNASTGAALLNPSLPSQSDVVET 440

Human   456 EGSHSNSPTNMAPSARLEEAVWRPY 480
            ||||||||||| |.|||||||||||
  Rat   441 EGSHSNSPTNM-PPARLEEAVWRPY 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RUNX1NP_001745.2 Runt 78..206 CDD:459963 127/127 (100%)
RunxI 389..480 CDD:430037 81/90 (90%)
Runx1XP_017453542.1 Runt 65..193 CDD:459963 127/127 (100%)
RunxI 374..464 CDD:430037 81/90 (90%)

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