DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RUNX1 and run

DIOPT Version :9

Sequence 1:NP_001745.2 Gene:RUNX1 / 861 HGNCID:10471 Length:480 Species:Homo sapiens
Sequence 2:NP_001285501.1 Gene:run / 33059 FlyBaseID:FBgn0003300 Length:510 Species:Drosophila melanogaster


Alignment Length:527 Identity:167/527 - (31%)
Similarity:231/527 - (43%) Gaps:134/527 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    23 LGMNPSRDV-----HDASTSRRFTPPSTALSPGKMSEALPLGAPDAGAALAGKLRSGDRSMVEVL 82
            :.:||::.:     |.||::...||..:..:....|.|..  :|...|.:...:.....|:.|:|
  Fly    49 IAINPAQSLANTSTHSASSTGSSTPDLSTNNTSSSSNATT--SPQNSAKMPSSMTDMFASLHEML 111

Human    83 ADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNA 147
            .::.|||.:|.||:.|||.||.|||.||:||.||||:||.||||||||::..||||||..||||.
  Fly   112 QEYHGELAQTGSPSILCSALPNHWRSNKSLPGAFKVIALDDVPDGTLVSIKCGNDENYCGELRNC 176

Human   148 TAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQKLDD 212
            |..||||||:|||||||||||||||||||||:.|.|.|:|:|.:|||:|||||||||..:..  .
  Fly   177 TTTMKNQVAKFNDLRFVGRSGRGKSFTLTITIATYPVQIASYSKAIKVTVDGPREPRSKQSY--G 239

Human   213 QTKPGSLS-FSERLSELEQLRRT------------AMRVSPHHPA----------PTPNPRASLN 254
            ...||:.: |....:.|:....|            |.....||||          |.|||..:.:
  Fly   240 YPHPGAFNPFMLNPAWLDAAYMTYGYADYFRHQAAAQAAQVHHPALAKSSASSVSPNPNPSVATS 304

Human   255 HSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPATPISPGRASGMTTLSAELSS 319
            .|:|              :|||         :|        .|||..::  .|:|..  :|.:.|
  Fly   305 SSSA--------------VQPS---------EY--------PHPAAAVA--AAAGQP--AAMMPS 334

Human   320 RLSTAPDLTAFSDPRQFP-------ALPSISDPRMHYPGAFTYSPTPVTSGIGIGMSAMGSATRY 377
            ....|| .|.::.| |||       |....:.|...:|..|         ....|:.|..:|..:
  Fly   335 PPGAAP-ATPYAIP-QFPFNHVAAAAAAKAATPHAFHPYNF---------AAAAGLRARNAALHH 388

Human   378 HTYLPPPYPGSSQAQGGPFQASSPSYHLY--------------YGASAG---SYQFSMVGGE--- 422
            .:......|.||:    |..:|....|:.              ..||.|   ..|..:|..|   
  Fly   389 QSEPVHVSPASSR----PSSSSPTQQHVLLKLNTSIETSSIHEQSASDGDSDDEQIDVVKSEFDL 449

Human   423 --------------RSPPRILPPCTNASTGSALLNPSLPNQSDVVEAEGSHSNSPTNMAPSARLE 473
                          ...|..:.|..:.|...|:.|...|:           ..:.|.:..:|..:
  Fly   450 DKSLDVAPLRMRCDLKAPSAMKPLYHESGPGAVANSRQPS-----------PETTTKIKSAAVQQ 503

Human   474 EAVWRPY 480
            :.|||||
  Fly   504 KTVWRPY 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RUNX1NP_001745.2 Runt 81..207 CDD:395684 88/125 (70%)
RunxI 389..480 CDD:400691 21/124 (17%)
runNP_001285501.1 Runt 114..235 CDD:279225 87/120 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3982
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 203 1.000 Inparanoid score I3751
Isobase 1 0.950 - 0 Normalized mean entropy S5099
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3284
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
87.990

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