DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RUNX1 and lz

DIOPT Version :9

Sequence 1:NP_001745.2 Gene:RUNX1 / 861 HGNCID:10471 Length:480 Species:Homo sapiens
Sequence 2:NP_511099.2 Gene:lz / 31883 FlyBaseID:FBgn0002576 Length:826 Species:Drosophila melanogaster


Alignment Length:563 Identity:181/563 - (32%)
Similarity:227/563 - (40%) Gaps:184/563 - (32%)


- Green bases have known domain annotations that are detailed below.


Human    84 DHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNAT 148
            :||||||||.:|.||||.||.|||.|||||:|||||||.:|.|||.||:.||||||..|||||.|
  Fly   282 EHPGELVRTSNPYFLCSALPAHWRSNKTLPMAFKVVALAEVGDGTYVTIRAGNDENCCAELRNFT 346

Human   149 AAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRR-------- 205
            ..|||.||:||||||||||||||||||||||.|:|||||||.:|||:|||||||||.        
  Fly   347 TQMKNDVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPRSKTSPTGGP 411

Human   206 HRQKLDDQTKPGSLSF--SERLSELEQLRR-------TAMRVSPHHPAPTPNPRASLNHSTAFNP 261
            |.:.|....:|....|  ::.|.|||.|||       |....:....|...|..|:...:.|..|
  Fly   412 HYRALGLGQRPYIDGFPSTKALHELESLRRSAKVAAVTTAAAAAATAASAANAVAAAAAAVAVTP 476

Human   262 -----------------------------QPQSQMQDTRQI-QPSPP------------WSYDQS 284
                                         .|.|.:....|: :|:.|            |:...|
  Fly   477 TGGGGGVAAGGVAGGAGAGLVQQLSSNYSSPNSTINSDCQVYKPNAPHIQAAEMMGAGEWTNGSS 541

Human   285 YQYLGSIASPSVHP-----------------------ATPISPGRASGMTTLSAELS-------S 319
            ........|.:.||                       |.|:|.|......|:...:.       :
  Fly   542 SSAAAYYHSHAHHPHAHHAHAHLQHQMALPPPPPPPAAAPVSVGVGGNGATMGMGMGVGVGMGMN 606

Human   320 RLSTAPDLTAFSDPRQFPA-LPSISDPRMHYPGAFTYSPTPVTSGIGIGMSAMGSATRYHTYLPP 383
            ......|.....:..|:.| ||::. |.||..| |...|.. |:|.|.|.:..|||::       
  Fly   607 HYGGGYDSANSLEAGQYAAHLPAVL-PEMHGHG-FATDPYQ-TAGYGGGNTGGGSASK------- 661

Human   384 PYPGSSQAQGGPF-QASSPSYHLY-YGASAGSYQFSMVGGERSPPRILPP--------------- 431
                |....||.: ||.|..|..| ||:...:.|:   |.:.:||...||               
  Fly   662 ----SELDYGGSYNQAWSNGYQNYQYGSCLATAQY---GPQAAPPPQPPPPPPVVLCPQLYSTVN 719

Human   432 --------------------CTNAS-------TGSALLNPSL----------------------- 446
                                .|:|.       |||:..:..:                       
  Fly   720 QNQIHLHLHSSEKLEQYLGTATSADHLTIGSLTGSSRSSIEIGQDQYHQQVHHAQQQQQQQQQQQ 784

Human   447 ----PNQSDVVEAEGSHSNSPTNMAPSARLEEA-----VWRPY 480
                |.|.. ||:.|....|......|||.|:.     |||||
  Fly   785 QVHHPQQQQ-VESAGEVGGSGAGGVESAREEDVGDLSQVWRPY 826

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RUNX1NP_001745.2 Runt 81..207 CDD:395684 95/130 (73%)
RunxI 389..480 CDD:400691 33/166 (20%)
lzNP_511099.2 Runt 283..404 CDD:279225 95/120 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3982
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000993
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X738
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
76.870

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