DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTL6A and Arp1

DIOPT Version :10

Sequence 1:NP_004292.1 Gene:ACTL6A / 86 HGNCID:24124 Length:429 Species:Homo sapiens
Sequence 2:NP_524331.2 Gene:Arp1 / 41566 FlyBaseID:FBgn0011745 Length:376 Species:Drosophila melanogaster


Alignment Length:420 Identity:139/420 - (33%)
Similarity:220/420 - (52%) Gaps:63/420 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    14 LVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLM--EIDGDKGKQGGPTYYIDTNALR 76
            :|.|.||..::||:|||..||..||..||    |.....:|  .::||        .::...|  
  Fly    12 VVIDNGSGVIKAGFAGEHIPKCRFPNYIG----RPKHVRVMAGALEGD--------IFVGPKA-- 62

Human    77 VPRENMEAIS---PLKNGMVEDWDSFQAILDHTY-KMHVKSEASLHPVLMSEAPWNTRAKREKLT 137
              .|:...:|   |:::|:|.||:..:.|..:.| |..:.:....||||::|||.|.|..|||..
  Fly    63 --EEHRGLLSIRYPMEHGIVTDWNDMERIWSYIYSKEQLATFTEDHPVLLTEAPLNPRRNREKAA 125

Human   138 ELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFI 202
            |..||..|.||.|:...|||:.:|.||.||::||||...|.|:|:::|:.:...|::..:||..:
  Fly   126 EFFFEGINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDV 190

Human   203 TMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVL 267
            |...:.|.:                  |||  .|::...:. ::.||....:|      :.|:..
  Fly   191 TRYLKTLIR------------------REG--FNFRSTAEF-EIVRSIKEKVC------YLATNP 228

Human   268 QVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTS 332
            |..::...|:.|       |:.|:|...:.|..|.:.||.||.|.    |.|....|:..|:..|
  Fly   229 QKEETVETEKFA-------YKLPDGKIFEIGPARFRAPEVLFRPD----LLGEECEGIHDVLMYS 282

Human   333 VGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGG 397
            :...|:|:|..||.:::::||:||.:.|.|||..||.:.:...:::::.|..   ||.:|:|:||
  Fly   283 IEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRIAAPQ---ERLYSTWMGG 344

Human   398 SILASLGTFQQMWISKQEYEEGGKQCVERK 427
            ||||||.||::|||||:||||.|::.|.||
  Fly   345 SILASLDTFKKMWISKREYEEEGQKAVHRK 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTL6ANP_004292.1 ASKHA_NBD_Arp4_ACTL6-like 8..420 CDD:466846 135/411 (33%)
Arp1NP_524331.2 ASKHA_NBD_Arp1 9..375 CDD:466820 139/420 (33%)

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