DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTL6A and Arp3

DIOPT Version :10

Sequence 1:NP_004292.1 Gene:ACTL6A / 86 HGNCID:24124 Length:429 Species:Homo sapiens
Sequence 2:NP_523968.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster


Alignment Length:462 Identity:123/462 - (26%)
Similarity:200/462 - (43%) Gaps:118/462 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    13 ALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDKGKQGGPTYYIDTNALRV 77
            |.|.|:|:...:.|:||...|:...|:||.:              .:..:.|      |||..|:
  Fly     7 ACVIDVGTGYSKLGFAGNKEPQFIIPSAIAI--------------KESARVG------DTNTRRI 51

Human    78 PR-----------ENMEAIS-----PLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAP 126
            .:           |..:|..     |:::|:|||||..:..|:.....::::|...|..|::|.|
  Fly    52 TKGIEDLDFFIGDEAFDATGYSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPP 116

Human   127 WNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRS--------TGLILDSGATHTTAIPVH 183
            .||...||...|:|||.:|:|..::...|||...|:..|        ||:::|||...|..|||.
  Fly   117 LNTPENREYTAEIMFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVA 181

Human   184 DGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRKEKLPQVTR 248
            :|||:...|...|:||..||...:.|.:|..:.:.|...:.:.:|:          |||      
  Fly   182 EGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAI----------KEK------ 230

Human   249 SWHNYMCNCVIQDFQASVLQVSDSTYDEQ------------VAAQMPTVHYEFPNGYNCDFGAER 301
              |.|:|..:.::|         :.||.:            ...:.|         :|.|.|.||
  Fly   231 --HCYICPDIAKEF---------AKYDTEPGKWIRNFSGVNTVTKAP---------FNVDVGYER 275

Human   302 LKIPEGLFDP--SNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRL 364
            ...||..|.|  ||     .:..:.:|.:|...:..|.||:|..||.:::::||:|:.:.|..||
  Fly   276 FLGPEIFFHPEFSN-----PDFTIPLSEIVDNVIQNCPIDVRRPLYNNIVLSGGSTMFKDFGRRL 335

Human   365 NRELSQKTPPSMRLKLIANNTTVER----------------RFSSWIGGSILASLGTFQQMWISK 413
            .|::.:.....:|   |:.|.:..|                |::.|.|||:|||...|.|:..:|
  Fly   336 QRDIKRSVDTRLR---ISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTK 397

Human   414 QEYEEGG 420
            ..|||.|
  Fly   398 AAYEEYG 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTL6ANP_004292.1 ASKHA_NBD_Arp4_ACTL6-like 8..420 CDD:466846 122/460 (27%)
Arp3NP_523968.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 123/462 (27%)

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