DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTL6A and Arp53D

DIOPT Version :10

Sequence 1:NP_004292.1 Gene:ACTL6A / 86 HGNCID:24124 Length:429 Species:Homo sapiens
Sequence 2:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster


Alignment Length:430 Identity:146/430 - (33%)
Similarity:225/430 - (52%) Gaps:57/430 - (13%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSGGVYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDKGKQGG 65
            ||..|.......|:|.|.||...:||::.||.|:..||:.:|.  .|.....|..:.||.     
  Fly    36 MSSEVDSNSHHAAVVIDNGSGVCKAGFSPEDTPRAVFPSIVGR--PRHLNVLLDSVIGDS----- 93

Human    66 PTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTR 130
               .|...|.| .|..:....|:::|||::||..:.:..|||:: ::::....|.|::|||.|.:
  Fly    94 ---VIGEAAAR-KRGILTLKYPIEHGMVKNWDEMEMVWQHTYEL-LRADPMDLPALLTEAPLNPK 153

Human   131 AKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDS--GATHTTAIPVHDGYVLQQGIV 193
            ..|||:||:||||:.:|||::...|||:.:|.||:.|:::||  |.|||  :|:::|:.|....|
  Fly   154 KNREKMTEIMFEHFQVPAFYVAVQAVLSLYATGRTVGIVVDSGDGVTHT--VPIYEGFALPHACV 216

Human   194 KSPLAGDFITMQCRELFQEMNIELVPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCV 258
            :..|||..:|....:|..|..:.:...   |.:|.|||       .||||..|:.::...|    
  Fly   217 RVDLAGRDLTDYLCKLLLERGVTMGTS---AEREIVRE-------IKEKLCYVSMNYAKEM---- 267

Human   259 IQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPSNVKGLSGNTML 323
              |....|                  ..||.|:|.....|.||.:.||.||.||    |.|..::
  Fly   268 --DLHGKV------------------ETYELPDGQKIVLGCERFRCPEALFQPS----LLGQEVM 308

Human   324 GVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVE 388
            |:......|:..||:|:|..:|.:::::||.|:.::...|..::|::..|||:|:|:   |.:.:
  Fly   309 GIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKV---NASPD 370

Human   389 RRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 428
            ||||.|.|||:||||.:||.|||...||||.|...|.|||
  Fly   371 RRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKC 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTL6ANP_004292.1 ASKHA_NBD_Arp4_ACTL6-like 8..420 CDD:466846 138/413 (33%)
Arp53DNP_477037.2 ASKHA_ATPase-like 47..406 CDD:483947 139/413 (34%)

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