DRSC/TRiP Functional Genomics Resources

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Protein Alignment TMEFF1 and Tmeff1

DIOPT Version :9

Sequence 1:NP_003683.2 Gene:TMEFF1 / 8577 HGNCID:11866 Length:380 Species:Homo sapiens
Sequence 2:NP_075409.1 Gene:Tmeff1 / 63845 RGDID:62005 Length:373 Species:Rattus norvegicus


Alignment Length:375 Identity:353/375 - (94%)
Similarity:362/375 - (96%) Gaps:4/375 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     6 AEAPLRLPAAPPLAFCCYTSVLLLFAFSLPGSRASNQPPGGGGGSGGDCPGGKGKSINCSELNVR 70
            |:||||||||||||.|.||||||||||.||||.|||||.||    |||||||:||||||||||:|
  Rat     3 AQAPLRLPAAPPLAVCGYTSVLLLFAFCLPGSGASNQPAGG----GGDCPGGRGKSINCSELNLR 63

Human    71 ESDVRVCDESSCKYGGVCKEDGDGLKCACQFQCHTNYIPVCGSNGDTYQNECFLRRAACKHQKEI 135
            |||:|.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|
  Rat    64 ESDIRACDESSCKYGGVCKEDGDGLKCACQFQCHTNYIPVCGSNGDTYQNECFLRRAACKHQKDI 128

Human   136 TVIARGPCYSDNGSGSGEGEEEGSGAEVHRKHSKCGPCKYKAECDEDAENVGCVCNIDCSGYSFN 200
            ||:|||||||||||||||||||||||..|||||||||||||||||||||||||||||||||||||
  Rat   129 TVVARGPCYSDNGSGSGEGEEEGSGAGAHRKHSKCGPCKYKAECDEDAENVGCVCNIDCSGYSFN 193

Human   201 PVCASDGSSYNNPCFVREASCIKQEQIDIRHLGHCTDTDDTSLLGKKDDGLQYRPDVKDASDQRE 265
            ||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||.||||
  Rat   194 PVCASDGSSYNNPCFVREASCIRQEQIDIRHLGHCTDTDDTSLLGKKDDGLQYRPDVKDAGDQRE 258

Human   266 DVYIGNHMPCPENLNGYCIHGKCEFIYSTQKASCRCESGYTGQHCEKTDFSILYVVPSRQKLTHV 330
            |||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   259 DVYIGSHMPCPENLNGYCIHGKCEFIYSTQKASCRCESGYTGQHCEKTDFSILYVVPSRQKLTHV 323

Human   331 LIAAIIGAVQIAIIVAIVMCITRKCPKNNRGRRQKQNLGHFTSDTSSRMV 380
            |||||||||||||||||||||||||||||||||||||||||||:||||||
  Rat   324 LIAAIIGAVQIAIIVAIVMCITRKCPKNNRGRRQKQNLGHFTSETSSRMV 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMEFF1NP_003683.2 KAZAL 99..143 CDD:197624 41/43 (95%)
KAZAL 189..235 CDD:197624 44/45 (98%)
PHA02887 <275..311 CDD:333467 35/35 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 359..380 19/20 (95%)
Tmeff1NP_075409.1 KAZAL 92..136 CDD:197624 41/43 (95%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 140..162 19/21 (90%)
KAZAL 182..228 CDD:197624 44/45 (98%)
PHA02887 <268..304 CDD:165214 35/35 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 352..373 19/20 (95%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83697240
Domainoid 1 1.000 299 1.000 Domainoid score I15591
eggNOG 1 0.900 - - E1_KOG3649
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H130458
Inparanoid 1 1.050 757 1.000 Inparanoid score I8067
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG38610
OrthoDB 1 1.010 - - D117767at9347
OrthoFinder 1 1.000 - - FOG0011351
OrthoInspector 1 1.000 - - oto129367
orthoMCL 1 0.900 - - OOG6_112931
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X8989
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1717.170

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