DRSC/TRiP Functional Genomics Resources

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Protein Alignment YARS1 and TyrRS

DIOPT Version :9

Sequence 1:NP_003671.1 Gene:YARS1 / 8565 HGNCID:12840 Length:528 Species:Homo sapiens
Sequence 2:NP_648895.1 Gene:TyrRS / 39829 FlyBaseID:FBgn0027080 Length:525 Species:Drosophila melanogaster


Alignment Length:527 Identity:356/527 - (67%)
Similarity:420/527 - (79%) Gaps:18/527 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     6 SPEEKLHLITRNLQEVLGEEKLKEILKERELKIYWGTATTGKPHVAYFVPMSKIADFLKAGCEVT 70
            :|.||..||||||||.||::||.:||.||:|||||||||||||||||||||||||||||||||||
  Fly     5 TPAEKKALITRNLQETLGDDKLTKILAERDLKIYWGTATTGKPHVAYFVPMSKIADFLKAGCEVT 69

Human    71 ILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPLEKLKFIKGTDYQLSKEYTLDVYR 135
            |||||||||||||||||.|||||..|||.||||||.|||||||||||:||:|||||||||||||:
  Fly    70 ILFADLHAYLDNMKAPWSLLELRTKYYEQVIKAMLSSIGVPLEKLKFVKGSDYQLSKEYTLDVYK 134

Human   136 LSSVVTQHDSKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGIDQRKIFTFAEKYLP 200
            |||||||||:||||||||||||:|||||||||||||||||||||||||||:||||||||:|||||
  Fly   135 LSSVVTQHDAKKAGAEVVKQVEYPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIFTFSEKYLP 199

Human   201 ALGYSKRVHLMNPMVPGLTGSKMSSSEEESKIDLLDRKEDVKKKLKKAFCEPGNVENNGVLSFIK 265
            .|||.||:|.||||||||.|.|||||||:|||||||...:||||||||||||||:.:||:|||:|
  Fly   200 QLGYEKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVK 264

Human   266 HVLFPLKSE---FVILRDEKWGGNKTYTAYVDLEKDFAAEVVHPGDLKNSVEVALNKLLDPIREK 327
            ||||.|..|   |.:.|:.:.||:.|:..|.||||.:|.:.:||||||.:||..:|:||||||:.
  Fly   265 HVLFSLFKEGEGFEVNREAEHGGDVTFLKYEDLEKYYAEDKLHPGDLKATVEKYINRLLDPIRKA 329

Human   328 FNTPALKKLASAAYPDPSKQKPMAKGPAKNSEPEEVIPSRLDIRVGKIITVEKHPDADSLYVEKI 392
            |..|.|:||::||||.|:|.|   .|.|..:..:|..|.||||||||::.|.:|||||:|||.||
  Fly   330 FENPELQKLSAAAYPPPAKVK---AGAAPAAGADEDAPHRLDIRVGKVVEVARHPDADTLYVLKI 391

Human   393 DVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVESQGMLLCASIEGINRQVEPLDP 457
            |:.||:|||::||||:||.:|||..|||.|||||||.||||:.|:||:||.| ...:..|||:..
  Fly   392 DLAEAQPRTIISGLVKFVTEEELNQRLVAVLCNLKPSKMRGILSEGMVLCTS-NADHTVVEPIVL 455

Human   458 PAGSAPGEHVFVKGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQWKQTNFM---------TK 513
            ||.:..|..:..:|: .|.|||:|.|||||:|||.||||.:.:.:|.||. ||:         :|
  Fly   456 PATATAGSRLSFEGF-SGTPDEQLNPKKKVWEKLSADFKTNSDGLAVWKD-NFLLTPEGEKLSSK 518

Human   514 LGSISCK 520
            |.:.|.|
  Fly   519 LANCSIK 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YARS1NP_003671.1 nt_trans 8..328 CDD:320711 252/322 (78%)
'HIGH' region 44..52 7/7 (100%)
'KMSKS' region 222..226 3/3 (100%)
PRK12267 <327..528 CDD:330948 103/203 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 339..363 9/23 (39%)
TyrRSNP_648895.1 nt_trans 8..334 CDD:294020 253/325 (78%)
tyrS 12..332 CDD:272976 251/319 (79%)
tRNA_bind_EMAP-II_like 364..466 CDD:239198 61/102 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165160117
Domainoid 1 1.000 472 1.000 Domainoid score I452
eggNOG 1 0.900 - - E1_COG0143
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2730
Inparanoid 1 1.050 694 1.000 Inparanoid score I685
Isobase 1 0.950 - 0 Normalized mean entropy S611
OMA 1 1.010 - - QHG54288
OrthoDB 1 1.010 - - D557463at33208
OrthoFinder 1 1.000 - - FOG0000771
OrthoInspector 1 1.000 - - oto90138
orthoMCL 1 0.900 - - OOG6_101224
Panther 1 1.100 - - LDO PTHR11586
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1461
SonicParanoid 1 1.000 - - X2335
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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