DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CDK10 and ppk23

DIOPT Version :9

Sequence 1:XP_011521707.1 Gene:CDK10 / 8558 HGNCID:1770 Length:392 Species:Homo sapiens
Sequence 2:NP_595739.1 Gene:ppk23 / 2540799 PomBaseID:SPBC18H10.15 Length:398 Species:Schizosaccharomyces pombe


Alignment Length:367 Identity:148/367 - (40%)
Similarity:206/367 - (56%) Gaps:50/367 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    26 PEHRLGRCRSVKEFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLL 90
            ||  |..|.|:.::|.|.:|.||:||||||..|..|:.:|||||::.|....|.||:|||||..|
pombe    63 PE--LKSCNSIDDYEILEKIEEGSYGIVYRGLDKSTNTLVALKKIKFDPNGIGFPITSLREIESL 125

Human    91 LRLRHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMPTPFSEAQVKCIVLQVLRGLQYLH 155
            ..:||.|||||::||||..|:.::|||.:.|.||.:||:|||..|.:::||.::||:|....::|
pombe   126 SSIRHDNIVELEKVVVGKDLKDVYLVMEFMEHDLKTLLDNMPEDFLQSEVKTLMLQLLAATAFMH 190

Human   156 RNFIIHRDLKVSNLLMTDKGCVKTADFGLARAYGVPVKPMTPKVVTLWYRAPELLLGTTTQTTSI 220
            .::.:|||||.|||||.:.|.:|.|||||||....|...:|..||||||||||||||..:....|
pombe   191 HHWYLHRDLKPSNLLMNNTGEIKLADFGLARPVSEPKSSLTRLVVTLWYRAPELLLGAPSYGKEI 255

Human   221 DMWVSKGLAAVRSSVPRAGGVSRRLAAVRSTVLCRAVGCILAELLAHRPLLPGTSEIHQIDLIVQ 285
            |||                                ::|||.||::...||..|.||:.|:..|..
pombe   256 DMW--------------------------------SIGCIFAEMITRTPLFSGKSELDQLYKIFN 288

Human   286 LLGTPSENIWPGFSKLPLVGQYSLRKQP----YNNLKHKFPWLSEAGLRLLHFLFMYDPKKRATA 346
            |||.|:...||.:..||...:.   |.|    ::.::...|.|:.....||:.|...:|.||.:|
pombe   289 LLGYPTREEWPQYFLLPYANKI---KHPTVPTHSKIRTSIPNLTGNAYDLLNRLLSLNPAKRISA 350

Human   347 GDCLESSYFKEKPLPCEPELMPTFPHHRNKRAAPATSEGQSK 388
            .:.||..||.|.|.|.:|:..|||         |:.::|:||
pombe   351 KEALEHPYFYESPRPKDPKFFPTF---------PSKAKGESK 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDK10XP_011521707.1 STKc_CDK10 31..371 CDD:173742 140/343 (41%)
PTZ00024 43..368 CDD:240233 134/328 (41%)
ppk23NP_595739.1 STKc_CDC2L1 68..359 CDD:173741 132/325 (41%)
PLN00009 71..361 CDD:177649 132/324 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 295 1.000 Domainoid score I308
eggNOG 1 0.900 - - E1_KOG0663
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001516
OrthoInspector 1 1.000 - - otm53587
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R970
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.840

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