DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SKO1 and kay

DIOPT Version :9

Sequence 1:NP_014232.1 Gene:SKO1 / 855554 SGDID:S000005111 Length:647 Species:Saccharomyces cerevisiae
Sequence 2:NP_001027577.2 Gene:kay / 3772082 FlyBaseID:FBgn0001297 Length:755 Species:Drosophila melanogaster


Alignment Length:702 Identity:134/702 - (19%)
Similarity:256/702 - (36%) Gaps:188/702 - (26%)


- Green bases have known domain annotations that are detailed below.


Yeast    22 PFEQSFASSKKALSLPGTISHPSLPKELSRNN--STSTITQHSQRSTHSLNSI------------ 72
            |.:.::..|:       :::|.:.|...|.||  ..::....:...:|:.|:.            
  Fly    64 PTQPAYQQSQ-------SVAHNAFPLRSSSNNYGHVASSAYAASSGSHNSNNAAAMAAVCQMQNF 121

Yeast    73 --PEENGNSTVTDNSN---HNDVKKDSPSFLPGQQRPTIISPPILTPGGSKRLPPLLLSPSILYQ 132
              .::.....:..|:|   .|..::......|.:.:.:.......|||.::    |.|:      
  Fly   122 FNQQQQQQQQLEFNNNCMPINYYQQQQQQHYPSESQSSASGWNPETPGQAQ----LALT------ 176

Yeast   133 ANSTTNPSQNSHSVSVSNSNPSAIGVSSTSGSLYPNSSSPSGTSLIRQPRNSNVTTSNSGNGFPT 197
              :||     .::.:.:..|.:|...:||:.     :|:.:|:.            :|..:.|..
  Fly   177 --ATT-----CNTTAAATCNTTAAATTSTTA-----TSAAAGSD------------NNHSDNFAM 217

Yeast   198 NDSQMPGFLLN---LSKSGLTPNESNIRTGLTPGILTQSYNYPVLPSINKNTITGSKNVNKSVTV 259
            :.|::..||.|   |.:.|      |..||.:...||.    |.|      |.|.::|:..::  
  Fly   218 DASEIATFLANELFLQQLG------NFETGQSVLTLTT----PTL------TPTTTRNIEDTL-- 264

Yeast   260 NGSIENHPHVNIMHPTVNG------TPLTPGLSSLLNLP-STGVLANPVFKSTPTTNTTDGTV-- 315
                 .|...:.....|.|      ..:.|....:|.:. .|||      .|.|...|.|.::  
  Fly   265 -----GHLLSDTQTDRVAGCAGFAVPKVLPNAIDVLGMGIPTGV------SSLPLQQTFDLSLGQ 318

Yeast   316 NNSISNSNFSPNTSTKAAVKMDNPAEFNAIEHSAHNHKENENLTTQIENNDQFNNKTRKRKRRMS 380
            .:...:||.|.| .|:...:.|.....:|  |:.....:..::.....|....||.:     .:.
  Fly   319 GSESEDSNASYN-DTQMNEEQDTTDTSSA--HTDSTSYQAGHIMAGSVNGGGVNNFS-----NVL 375

Yeast   381 STSSTSKASRKNSISRKNSAVTTAPAQKDDVENNKISNNVTLDENEEQERKRKEFLERNRVAASK 445
            :..|:|:.|.  |:...|:..:..||::........|.|:|    .|:|:||....|||:.||::
  Fly   376 AAVSSSRGSA--SVGSSNANTSNTPARRGGGRRPNRSTNMT----PEEEQKRAVRRERNKQAAAR 434

Yeast   446 FRKRKKEYIKKIENDLQFYES-------------------EY-------------DDLTQVIGKL 478
            .|||:.:...::..:::..|.                   ||             .|:..|:  .
  Fly   435 CRKRRVDQTNELTEEVEQLEKRGESMRKEIEVLTNSKNQLEYLLATHRATCQKIRSDMLSVV--T 497

Yeast   479 C-GIIP--------SSSSNSQFNVNVSTPSSSSPPSTSLIALLESSISRSDYSSAMSVLSNMKQL 534
            | |:|.        ||.|.:..:.|.::..||:...|.:.|.|.|: .||:....:...:|:..|
  Fly   498 CNGLIAPAGLLSAGSSGSGASSHHNHNSNDSSNGTITGMDATLNST-GRSNSPLDLKPAANIDSL 561

Yeast   535 ICETNFYRRGGKNPRDD-MDGQED---SFNKDTNVVKSENAGYPSVNSRPIILDKKYSLNSGANI 595
            :...          :|: :||..|   |.::| ....|:....|.:::.|.:........:||: 
  Fly   562 LMHI----------KDEPLDGAIDSGSSLDQD-GPPPSKRITLPPMSTMPHVHLSTILTPTGAS- 614

Yeast   596 SKSNTTTNNVGNSAQNIINSCYSVT---------NPLVINANSDTHDTNKHD 638
              |.:....:.::|.....|.:.||         |.:..|.||.|  .|.|:
  Fly   615 --SGSLQTPITSTAPGGFGSAFPVTSNGSSINNINSIGNNMNSPT--LNAHN 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SKO1NP_014232.1 Aft1_HRA <196..>228 CDD:371723 9/34 (26%)
bZIP_ATF2 431..482 CDD:269835 17/83 (20%)
coiled coil 432..482 CDD:269835 16/82 (20%)
kayNP_001027577.2 bZIP_Fos 420..481 CDD:269869 13/60 (22%)
coiled coil 421..480 CDD:269869 12/58 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1414
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R103
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.930

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