DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCRT2 and Scrt2

DIOPT Version :10

Sequence 1:NP_149120.1 Gene:SCRT2 / 85508 HGNCID:15952 Length:307 Species:Homo sapiens
Sequence 2:NP_001178834.1 Gene:Scrt2 / 366229 RGDID:1564796 Length:305 Species:Rattus norvegicus


Alignment Length:307 Identity:281/307 - (91%)
Similarity:286/307 - (93%) Gaps:2/307 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MPRSFLVKKIKGDGFQCSGVPAPTYHPLETAYVLPGARGPPGDNGYAPHRLPPSSYDADQKPGLE 65
            |||||||||||.||||||||||||||||||||||||.|||||||||..|.:|||.||.:||||||
  Rat     1 MPRSFLVKKIKADGFQCSGVPAPTYHPLETAYVLPGTRGPPGDNGYVAHCMPPSGYDGEQKPGLE 65

Human    66 LAPAEPAYPPAAPEEYSDPESPQSSLSARYFRGEAAVTDSYSMDAFFISDGRSRRRRGGGGGDAG 130
            |||.|||||.||.||||||||||||||||||||||||||||||||||||||||||||.|.||||.
  Rat    66 LAPTEPAYPAAASEEYSDPESPQSSLSARYFRGEAAVTDSYSMDAFFISDGRSRRRRAGAGGDAA 130

Human   131 GSGDAGGAGGRAGRAGAQAGGGHRHACAECGKTYATSSNLSRHKQTHRSLDSQLARKCPTCGKAY 195
            |:||.||.|.||||:||.|||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 GAGDGGGGGERAGRSGATAGGGHRHACAECGKTYATSSNLSRHKQTHRSLDSQLARKCPTCGKAY 195

Human   196 VSMPALAMHLLTHNLRHKCGVCGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQ 260
            |||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 VSMPALAMHVLTHNLRHKCGVCGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQ 260

Human   261 THSAFKHYRCRQCDKSFALKSYLHKHCEAACAKAAEPPPPTPAGPAS 307
            |||||||||||||||||||||||||||||||.|||||||  .|||||
  Rat   261 THSAFKHYRCRQCDKSFALKSYLHKHCEAACVKAAEPPP--SAGPAS 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCRT2NP_149120.1 SNAG domain. /evidence=ECO:0000250 1..20 17/18 (94%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..90 44/55 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..148 23/31 (74%)
C2H2 Zn finger 157..177 CDD:275368 19/19 (100%)
zf-C2H2 212..234 CDD:395048 21/21 (100%)
C2H2 Zn finger 214..234 CDD:275368 19/19 (100%)
zf-H2C2_2 227..250 CDD:463886 22/22 (100%)
C2H2 Zn finger 242..262 CDD:275368 19/19 (100%)
zf-C2H2 242..262 CDD:395048 19/19 (100%)
zf-H2C2_2 254..278 CDD:463886 23/23 (100%)
C2H2 Zn finger 270..286 CDD:275368 15/15 (100%)
Scrt2NP_001178834.1 C2H2 Zn finger 157..177 CDD:275368 19/19 (100%)
COG5048 <210..>277 CDD:227381 66/66 (100%)
C2H2 Zn finger 214..234 CDD:275368 19/19 (100%)
C2H2 Zn finger 242..262 CDD:275368 19/19 (100%)
C2H2 Zn finger 270..286 CDD:275368 15/15 (100%)

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