DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCRT2 and rst2

DIOPT Version :10

Sequence 1:NP_149120.1 Gene:SCRT2 / 85508 HGNCID:15952 Length:307 Species:Homo sapiens
Sequence 2:NP_593288.1 Gene:rst2 / 2543031 PomBaseID:SPAC6F12.02 Length:567 Species:Schizosaccharomyces pombe


Alignment Length:57 Identity:23/57 - (40%)
Similarity:32/57 - (56%) Gaps:7/57 - (12%)


- Green bases have known domain annotations that are detailed below.


Human   211 RHKCGVCGKAFSRPWLLQGHMRSHTGEKPFGCAH-------CGKAFADRSNLRAHMQ 260
            ::.|..|.:||:|...|:.|:||||.||||.|:.       ||:.|:.|..|..|.|
pombe    69 QYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQ 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCRT2NP_149120.1 SNAG domain. /evidence=ECO:0000250 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..90
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..148
C2H2 Zn finger 157..177 CDD:275368
zf-C2H2 212..234 CDD:395048 8/21 (38%)
C2H2 Zn finger 214..234 CDD:275368 8/19 (42%)
zf-H2C2_2 227..250 CDD:463886 13/29 (45%)
C2H2 Zn finger 242..262 CDD:275368 8/26 (31%)
zf-C2H2 242..262 CDD:395048 8/26 (31%)
zf-H2C2_2 254..278 CDD:463886 3/7 (43%)
C2H2 Zn finger 270..286 CDD:275368
rst2NP_593288.1 COG5048 37..547 CDD:227381 23/57 (40%)
C2H2 Zn finger 72..92 CDD:275368 8/19 (42%)
C2H2 Zn finger 100..128 CDD:275368 8/26 (31%)
Blue background indicates that the domain is not in the aligned region.

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