DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SCRT2 and SPOM_SPAC11D3.17

DIOPT Version :10

Sequence 1:NP_149120.1 Gene:SCRT2 / 85508 HGNCID:15952 Length:307 Species:Homo sapiens
Sequence 2:NP_001342806.1 Gene:SPOM_SPAC11D3.17 / 2543006 PomBaseID:SPAC11D3.17 Length:585 Species:Schizosaccharomyces pombe


Alignment Length:52 Identity:15/52 - (28%)
Similarity:21/52 - (40%) Gaps:0/52 - (0%)


- Green bases have known domain annotations that are detailed below.


Human   237 EKPFGCAHCGKAFADRSNLRAHMQTHSAFKHYRCRQCDKSFALKSYLHKHCE 288
            ::.|.|..|.|.|....||..|...||..:...|..|:.....|..|.:|.:
pombe    28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQ 79

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCRT2NP_149120.1 SNAG domain. /evidence=ECO:0000250 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..90
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..148
C2H2 Zn finger 157..177 CDD:275368
zf-C2H2 212..234 CDD:395048
C2H2 Zn finger 214..234 CDD:275368
zf-H2C2_2 227..250 CDD:463886 4/12 (33%)
C2H2 Zn finger 242..262 CDD:275368 7/19 (37%)
zf-C2H2 242..262 CDD:395048 7/19 (37%)
zf-H2C2_2 254..278 CDD:463886 7/23 (30%)
C2H2 Zn finger 270..286 CDD:275368 4/15 (27%)
SPOM_SPAC11D3.17NP_001342806.1 COG5048 1..527 CDD:227381 15/52 (29%)
C2H2 Zn finger 33..53 CDD:275368 7/19 (37%)
C2H2 Zn finger 61..82 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.