DRSC/TRiP Functional Genomics Resources

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Protein Alignment LGR5 and CG7509

DIOPT Version :10

Sequence 1:NP_003658.1 Gene:LGR5 / 8549 HGNCID:4504 Length:907 Species:Homo sapiens
Sequence 2:NP_647931.1 Gene:CG7509 / 38579 FlyBaseID:FBgn0035575 Length:615 Species:Drosophila melanogaster


Alignment Length:448 Identity:124/448 - (27%)
Similarity:179/448 - (39%) Gaps:94/448 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    18 LATGG----SSPRSGVLLRGCPTHCHCEPDGRMLLRVDCSDLGLSELPSN--LSVFTSYLDLSMN 76
            ||||.    :...|||        |.|.||.:..   .|.:..|..:|..  :.:....:|||.|
  Fly   138 LATGSQIEWNHCTSGV--------CRCNPDTKSF---TCWNTNLKSVPVTQVIPMNMVNIDLSRN 191

Human    77 NISQLLPNPLPSLRFLEELRLAGNALTYIPKGAFTGLYSLKVLMLQNNQLRHVPTEALQNLRSLQ 141
            .:|.|..:....|..|:||.::.|.|.::|...|..|.||.||.:|||||..:.......||:|.
  Fly   192 ILSTLHKDTFRGLTVLKELDISHNVLDFLPFDLFQDLDSLLVLRIQNNQLEDIDHRTFWKLRNLN 256

Human   142 SLRLDANHISYVPPSCFSGLHSLRHLWLDDNALTEIPVQAFRSLSALQAMTLALNKIHHIPDYAF 206
            .|.|..|.|..:|.|.|  .|:.|                                         
  Fly   257 ILDLSKNEIGMLPESIF--YHAQR----------------------------------------- 278

Human   207 GNLSSLVVLHLHNNRIHSLGKKCFDGLHSLETLDLNYNNLDEFPT-AIRTLSNLKELGFHSNNIR 270
                 |.|:::.:|:|.:...........||.||::.|.:.|..: :||.|:.||.|.|..|.|.
  Fly   279 -----LTVINMCDNQIQNFPPNLLRDQLMLEELDMSRNKISELSSGSIRYLTKLKTLDFGWNQIA 338

Human   271 SIPEKAFVGNPSLITIHFYDNPIQFVGRSAFQHLPELRTLTLNGASQITEFPDLTGTANLESLTL 335
            .|.:..|.|..||.|:..::|.|..:..:.|.:|                       |||.:|.|
  Fly   339 KIDDDFFAGLRSLRTLSLHNNRISSLSGTIFNNL-----------------------ANLVTLDL 380

Human   336 TGAQISSLPQTVCNQLPNLQVLDLSYNLLEDLPS--FSVCQKLQKIDLRHNEIYEIKVDTFQQLL 398
            |..:||.:......:|.||..|.|..|.:..:|:  |.....|.::.|..|.:..::.|.||.|.
  Fly   381 TTNRISHIDGNAFVELNNLNELFLGQNSMSSIPADLFLNVSALTRLTLFSNNLTTLEADDFQGLN 445

Human   399 SLRSLNLAWNKIAIIHPNAFSTLPSLIKLDLSSNLLSSFPITGLHGLTHL---KLTGN 453
            :|:.|.|..|.:......||..|..|.||.:.||.|...|...||||.:|   ||..|
  Fly   446 NLKILLLNNNILKNFDARAFEPLSQLEKLRIDSNKLMFLPHGALHGLKNLVAVKLDKN 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LGR5NP_003658.1 LRRNT 33..65 CDD:396168 7/33 (21%)
leucine-rich repeat 68..91 CDD:275380 7/22 (32%)
LRR 92..477 CDD:443914 103/368 (28%)
leucine-rich repeat 92..115 CDD:275380 8/22 (36%)
leucine-rich repeat 116..139 CDD:275380 9/22 (41%)
leucine-rich repeat 140..163 CDD:275380 8/22 (36%)
leucine-rich repeat 164..187 CDD:275380 1/22 (5%)
leucine-rich repeat 188..211 CDD:275380 0/22 (0%)
leucine-rich repeat 212..235 CDD:275380 4/22 (18%)
leucine-rich repeat 236..258 CDD:275380 9/22 (41%)
leucine-rich repeat 259..282 CDD:275380 9/22 (41%)
leucine-rich repeat 283..304 CDD:275380 5/20 (25%)
leucine-rich repeat 307..353 CDD:275378 9/45 (20%)
leucine-rich repeat 354..375 CDD:275378 6/22 (27%)
leucine-rich repeat 376..389 CDD:275378 3/12 (25%)
leucine-rich repeat 400..423 CDD:275378 7/22 (32%)
leucine-rich repeat 445..459 CDD:275378 5/12 (42%)
7tmA_LGR5 558..831 CDD:320485
TM helix 1 559..585 CDD:320485
TM helix 2 592..617 CDD:320485
TM helix 3 637..667 CDD:320485
TM helix 4 679..701 CDD:320485
TM helix 5 721..750 CDD:320485
TM helix 6 759..789 CDD:320485
TM helix 7 799..824 CDD:320485
CG7509NP_647931.1 LRR 185..>437 CDD:443914 84/322 (26%)
leucine-rich repeat 187..206 CDD:275380 7/18 (39%)
leucine-rich repeat 207..230 CDD:275380 8/22 (36%)
leucine-rich repeat 231..254 CDD:275380 9/22 (41%)
leucine-rich repeat 255..278 CDD:275380 9/24 (38%)
leucine-rich repeat 279..302 CDD:275380 4/22 (18%)
leucine-rich repeat 303..326 CDD:275380 9/22 (41%)
leucine-rich repeat 327..350 CDD:275380 9/22 (41%)
leucine-rich repeat 351..374 CDD:275380 6/45 (13%)
leucine-rich repeat 375..398 CDD:275380 7/22 (32%)
leucine-rich repeat 399..422 CDD:275380 6/22 (27%)
leucine-rich repeat 423..443 CDD:275380 5/19 (26%)
leucine-rich repeat 471..494 CDD:275380 11/22 (50%)
PCC 476..>561 CDD:188093 12/28 (43%)
Blue background indicates that the domain is not in the aligned region.

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