DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SCIN and Gel

DIOPT Version :10

Sequence 1:NP_001106177.1 Gene:SCIN / 85477 HGNCID:21695 Length:715 Species:Homo sapiens
Sequence 2:NP_524865.2 Gene:Gel / 46008 FlyBaseID:FBgn0010225 Length:798 Species:Drosophila melanogaster


Alignment Length:763 Identity:278/763 - (36%)
Similarity:402/763 - (52%) Gaps:88/763 - (11%)


- Green bases have known domain annotations that are detailed below.


Human     2 ARELYHEEFARAGKQAGLQVWRIEKLELVPVPQSAHGDFYVGDAYLVLHTA--KTSRGFTYHLHF 64
            ||.:.|..||.||:..||::||||..|.|..|::.:|.||.||:::||:|.  |..:..::.:||
  Fly    55 ARRVMHPSFANAGRTPGLEIWRIENFEPVIYPKTNYGKFYTGDSFIVLNTIENKKDKKLSWDVHF 119

Human    65 WLGKECSQDESTAAAIFTVQMDDYLGGKPVQNRELQGYESNDFVSYFKGGLKYKAGGVASGLNHV 129
            |||.|.|.||:.||||.|||:||.|.|.|||:||:|.:||..|:||||.|::|:.|||.:|..||
  Fly   120 WLGLETSTDEAGAAAILTVQLDDLLNGGPVQHREVQDHESQLFLSYFKNGIRYEQGGVGTGFKHV 184

Human   130 LTNDLTAKRLLHVKGRRVVRATEVPLSWDSFNKGDCFIIDLGTEIYQWCGSSCNKYERLKANQVA 194
            .||.....||..|||:|.||..:|.||..|.|.|||||:|.|::||.:.||...:.|:|||...|
  Fly   185 ETNAQGETRLFQVKGKRNVRVRQVNLSVSSMNTGDCFILDAGSDIYVYVGSQAKRVEKLKAISAA 249

Human   195 TGIRYNERKGRSELIVVEEGS---EPSELIKVL--GEKPELPDGGD-DDDIIADISNRKMAKLYM 253
            ..||..:..||:.:.:|::.|   :......||  |...::||... |:|...:.::.....||.
  Fly   250 NQIRDQDHNGRARVQIVDDFSTDADKQHFFDVLGSGSADQVPDESTADEDSAFERTDAAAVSLYK 314

Human   254 VSDASGSMRVTVVAEENPFSMAMLLSEECFILDHGAAKQIFVWKGKDANPQERKAAMKTAEEFLQ 318
            ||||||.::|.::.:: |.:.|||.:.||||||.|:.  ||||.||.|..:|:..||..|:|||:
  Fly   315 VSDASGKLKVDIIGQK-PLTQAMLDTRECFILDTGSG--IFVWVGKGATQKEKTDAMAKAQEFLR 376

Human   319 QMNYSKNTQIQVLPEGGETPIFKQFFKDWRDKDQSD--------GFGKVYVTEKVAQIKQIPFDA 375
            ...|...|||..:.||.|:..|||:|..|||...|.        |.|    ::::....:|....
  Fly   377 TKKYPAWTQIHRIVEGSESAPFKQYFDTWRDAGMSHSRLIRSALGIG----SDELLNDDEIDSVV 437

Human   376 SKLHSSPQMAAQHNMVDDGSGKVE--IWRVENNG--RIQVDQNSYGE---FYGGDCYIILYTY-- 431
            ::|..|...|... |.|.|...:|  ...|...|  .|.|....:.|   ..|...|::.|.|  
  Fly   438 TQLKKSGGRAFGF-MPDHGQNVIETITQYVAKPGSDEIVVSTVPFDEKLPLLGFASYVLTYNYEA 501

Human   432 ---PRGQIIYTWQGANATRDELTTSAFLTVQLDRSLGG--QAVQIRVSQGKEPVHLLSLFKDKPL 491
               ..|.:.|.|.|..|      ::|......:..|.|  ..:.::.:||.||.|...:||.|.|
  Fly   502 NNGDTGSLTYVWHGVKA------SAAARKRAFEEGLVGSKDGLLVQTNQGHEPRHFYKIFKGKLL 560

Human   492 IIYKNGTSKKGGQAPAPPT-RLFQVRRNLASITRIVEVDVDANSLNSNDVFVLKLPQNSG----- 550
            ..:          ...|.| :||::|..:.|.....||..|::||.|:|.|||    :||     
  Fly   561 TSF----------TALPVTAQLFRIRGTVESDVHASEVAADSSSLASSDAFVL----HSGKSHKI 611

Human   551 YIWVGKGASQEEEKGA-----EYVASVLKCKTLRIQEGEEPEEFWNSLGGKKDYQTS------PL 604
            |||.|.|||..|::.|     :|...|   :..:::||.||:|||..|.|:..|..|      ||
  Fly   612 YIWNGLGASAFEKQAAVDRFSDYWDDV---ELEQVEEGAEPDEFWEELNGEGQYDRSLGDDGAPL 673

Human   605 LETQAEDHPPRLYGCSNKTGRFV-IEEIPGEFTQDDLAEDDVMLLDAWEQIFIWIGKDANEVEKK 668
            ||:       ||:.|...:|.|: :||: .::.|:||..||:|||||.::|::|:|...:|.|..
  Fly   674 LES-------RLFHCHLSSGGFLKVEEV-AQYEQEDLDSDDIMLLDAGDEIYLWVGYGVSEEENG 730

Human   669 ESLKSAKMYLETDPSGRDKRT-PIVIIKQGHEPPTFTGWFLGWDSSKW 715
            :.|.:||:|...:|:.|...| .|:.:.||.||..|...|..||.:.|
  Fly   731 KLLDTAKLYFNLEPTARSFDTVSIIRVPQGKEPRVFKRMFPNWDDNYW 778

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCINNP_001106177.1 Actin-severing. /evidence=ECO:0000255 1..363 161/376 (43%)
gelsolin_S1_like 10..121 CDD:200446 57/112 (51%)
gelsolin_S2_like 136..225 CDD:200445 37/93 (40%)
gelsolin_S3_like 246..346 CDD:200448 45/99 (45%)
Ca(2+)-dependent actin binding 364..715 116/383 (30%)
gelsolin_S4_like 390..486 CDD:200449 26/109 (24%)
gelsolin_S5_like 508..598 CDD:200444 38/100 (38%)
gelsolin_S6_like 613..711 CDD:200447 36/99 (36%)
GelNP_524865.2 gelsolin_S1_like 63..176 CDD:200446 57/112 (51%)
gelsolin_S2_like 191..283 CDD:200445 36/91 (40%)
gelsolin_S3_like 307..404 CDD:200448 45/99 (45%)
ADF_gelsolin 470..558 CDD:472830 23/93 (25%)
ADF_gelsolin 569..661 CDD:472830 37/98 (38%)
gelsolin_S6_like 675..774 CDD:200447 37/106 (35%)

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