DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SCIN and fliI

DIOPT Version :10

Sequence 1:NP_001106177.1 Gene:SCIN / 85477 HGNCID:21695 Length:715 Species:Homo sapiens
Sequence 2:NP_525097.1 Gene:fliI / 33110 FlyBaseID:FBgn0000709 Length:1256 Species:Drosophila melanogaster


Alignment Length:781 Identity:219/781 - (28%)
Similarity:355/781 - (45%) Gaps:101/781 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    14 GKQAGLQVWRIEKLELVPVPQSAHGDFYVGDAYLVLHTAKTSRG-FTYHLHFWLGKECSQDESTA 77
            |:..||.:|.||......:.:..||.||.||.|:||.|.....| ..:.:.||:|.|.:.|:...
  Fly   494 GQLPGLTIWEIENFLPNKIEEVVHGKFYEGDCYIVLKTKFDDLGLLDWEIFFWIGNEATLDKRAC 558

Human    78 AAIFTVQMDDYLGGKPVQNRELQGYESNDFVSYFKGGLKYKAGGVASGLNHVLTNDLTAKRLLHV 142
            |||..|.:.::||.:....||.||.||..|:|.|:..:.|..||      ...|...|.:.::|:
  Fly   559 AAIHAVNLRNFLGARCRTVREEQGDESEQFLSLFETEVIYIEGG------RTATGFYTIEEMIHI 617

Human   143 KGRRVVRATEVPLSWD-------SFNKGDCFIIDLGTEIYQWCGSSCNKYERLKANQVATGIRYN 200
            ....:|.|....:..:       |.:....|::||||.||.|.|.........||..:|..|...
  Fly   618 TRLYLVHAYGATIHLEPVAPAITSLDPRHAFVLDLGTHIYIWMGERSKNTLNSKARLMAEKISKT 682

Human   201 ERKGRSELIVVEEGSEPSELIKVLGEKPELPDGGD-DDDIIADISNRKMAKLYMVSDASGSMRV- 263
            |||.:.|:.:..:|.|.:|..:.||...|..|..: ..:.:.:.......:||.|....|.:.: 
  Fly   683 ERKNKCEIQLERQGEESAEFWQGLGMTSEEADAAEPPKEHVPEDYQPVQPRLYQVQLGMGYLELP 747

Human   264 TVVAEENPFSMAMLLSEECFILDHGAAKQIFVWKGKDANPQERKAAMKTAEEFLQQMNYSKNTQI 328
            .|...|......:|.|:..:|||  ....:|||.||.:....|.||:|.:.|....|:......:
  Fly   748 QVELPEQKLCHTLLNSKHVYILD--CYTDLFVWFGKKSTRLVRAAAVKLSRELFNMMDRPDYALV 810

Human   329 QVLPEGGETPIFKQFFKDWRDKDQSDGFGKVYVTEKVAQI----------KQIPFDASKL----H 379
            ..:|||.|..||:..|..| |:..:..|.:  ..:.||:.          ::...|.:.|    .
  Fly   811 MRVPEGNEMQIFRTKFAGW-DEVMAVDFTR--TAKSVAKTGANLTQWARQQETRTDLAALFMPRQ 872

Human   380 SSPQMAAQHNMVDDGSGKVEIWR---VENNGRIQVDQNSYGEFYGGDCYIILYTY---------- 431
            |:..:|....:.::.:..:|:..   :||...:::.:...|.||.|:||:.|..|          
  Fly   873 SAMPLAEAEQLEEEWNYDLEMMEAFVLENKKFVRLPEEELGRFYTGECYVFLCRYCIPIEEPENG 937

Human   432 -------------------PRGQI---IYTWQGANATRDELTTSAFLTVQLDRSLGGQAVQ-IRV 473
                               |..:|   :|.|||.||......|..|...:..:::.|:.:: :|:
  Fly   938 SEDGANPAADVSKSSANNQPEDEIQCVVYFWQGRNAGNMGWLTFTFTLQKKFKAMFGEELEVVRI 1002

Human   474 SQGKEPVHLLSLFKDKPLIIYKNGTSKKGGQAPA-PPTRLFQVRRNLASI-TRIVEVDVDANSLN 536
            .|.:|.:..:|.||.| .||:......|...|.. .|...|.:|.|..:: ||:::::.||..||
  Fly  1003 FQQQENLKFMSHFKRK-FIIHTGKRKDKAHTAKGKSPVEFFHLRSNGGALTTRLIQINPDAVHLN 1066

Human   537 SNDVFVLKLP------QNSG--YIWVGKGASQEEEKGAEYVASVL---KCKTLRI-QEGEEPEE- 588
            |...::|.:|      ..||  |:|:|..|..||.|..:.:|..:   ...:|:| .||:|||. 
  Fly  1067 STFCYILHVPFETEDDSQSGIVYVWIGSKACNEEAKLVQDIAEQMFNSPWVSLQILNEGDEPENF 1131

Human   589 FWNSLGGKKDYQTSPLLETQAE-DHPPRLYGCSNKTGRFVIEEIPGEFTQDDLAEDDVMLLDAWE 652
            ||.:|||:|.|      :|.|| .:..||:.|||:.|.:.:.|...:|.|||||:||:|:||..|
  Fly  1132 FWVALGGRKPY------DTDAEYMNYTRLFRCSNERGYYTVAEKCADFCQDDLADDDIMILDNGE 1190

Human   653 QIFIWIGKDANEVEKKESLKSAKMYLE----TDPSGRDKRTPIVIIKQGHEPPTFTGWFLGWDSS 713
            .:|:|:|...:|||.|.:.|||::|::    ..|   ::...:.:..:..|...||..|.||.:.
  Fly  1191 HVFLWMGPRCSEVEVKLAYKSAQVYIQHMRIKQP---ERPRKLFLTMKNKESRRFTKCFHGWSAF 1252

Human   714 K 714
            |
  Fly  1253 K 1253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCINNP_001106177.1 Actin-severing. /evidence=ECO:0000255 1..363 102/358 (28%)
gelsolin_S1_like 10..121 CDD:200446 38/107 (36%)
gelsolin_S2_like 136..225 CDD:200445 24/95 (25%)
gelsolin_S3_like 246..346 CDD:200448 29/100 (29%)
Ca(2+)-dependent actin binding 364..715 117/421 (28%)
gelsolin_S4_like 390..486 CDD:200449 26/131 (20%)
gelsolin_S5_like 508..598 CDD:200444 35/103 (34%)
gelsolin_S6_like 613..711 CDD:200447 36/101 (36%)
fliINP_525097.1 leucine-rich repeat 7..30 CDD:275380
leucine-rich repeat 31..53 CDD:275380
LRR 33..405 CDD:443914
leucine-rich repeat 54..76 CDD:275380
leucine-rich repeat 77..101 CDD:275380
leucine-rich repeat 102..124 CDD:275380
leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 149..171 CDD:275380
leucine-rich repeat 172..195 CDD:275380
leucine-rich repeat 196..220 CDD:275380
leucine-rich repeat 221..243 CDD:275380
leucine-rich repeat 244..266 CDD:275380
leucine-rich repeat 267..289 CDD:275380
leucine-rich repeat 290..314 CDD:275380
leucine-rich repeat 315..335 CDD:275380
leucine-rich repeat 338..360 CDD:275378
gelsolin_S1_like 491..602 CDD:200446 38/107 (36%)
gelsolin_like 618..706 CDD:200436 23/87 (26%)
gelsolin_S3_like 729..828 CDD:200448 29/100 (29%)
gelsolin_like 920..1015 CDD:200436 19/94 (20%)
gelsolin_S5_like 1037..1141 CDD:200444 35/103 (34%)
gelsolin_S6_like 1151..1250 CDD:200447 36/101 (36%)
Blue background indicates that the domain is not in the aligned region.

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