DRSC/TRiP Functional Genomics Resources

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Protein Alignment GFM1 and gfm1

DIOPT Version :10

Sequence 1:NP_001295093.1 Gene:GFM1 / 85476 HGNCID:13780 Length:770 Species:Homo sapiens
Sequence 2:NP_001073463.1 Gene:gfm1 / 561840 ZFINID:ZDB-GENE-061013-79 Length:745 Species:Danio rerio


Alignment Length:770 Identity:584/770 - (75%)
Similarity:675/770 - (87%) Gaps:25/770 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     1 MRLLGAAAVAALGRGRAPASLGWQRKQVNWKACRWSSSGVIPNEKIRNIGISAHIDSGKTTLTER 65
            ||||.||  ::|.|...|.....|:..:   :||..|:|:.|||:||||||||||||||||||||
Zfish     1 MRLLRAA--SSLARLHRPGHSTLQQVLI---SCRSCSNGITPNERIRNIGISAHIDSGKTTLTER 60

Human    66 VLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTMWKDVNINIIDTPGHVDFTIE 130
            |||||||||:||||:|||||||:||||||||||||||||||||||||:.||||||||||||||||
Zfish    61 VLYYTGRIAEMHEVRGKDGVGAIMDSMELERQRGITIQSAATYTMWKNHNINIIDTPGHVDFTIE 125

Human   131 VERALRVLDGAVLVLCAVGGVQCQTMTVNRQMKRYNVPFLTFINKLDRMGSNPARALQQMRSKLN 195
            |||:|||||||||||||||||||||:|||||||||:||||||||||||:|:||.|||||:|:|||
Zfish   126 VERSLRVLDGAVLVLCAVGGVQCQTVTVNRQMKRYSVPFLTFINKLDRLGANPNRALQQLRTKLN 190

Human   196 HNAAFMQIPMGLEGNFKGIVDLIEERAIYFDGDFGHFLRDFLPLLWNWDRRSGSQIVRYGEIPAE 260
            .||||:.||:|||||.:||:||||||:|.|||.||                   :.|||.:||.|
Zfish   191 QNAAFVNIPIGLEGNLRGIIDLIEERSIVFDGPFG-------------------ESVRYEDIPPE 236

Human   261 LRAAATDHRQELIECVANSDEQLGEMFLEEKIPSISDLKLAIRRATLKRSFTPVFLGSALKNKGV 325
            :|:.|.|.||||:|||||:||.||||||||::|::.|||.|:||||:||||:||.:|||||||||
Zfish   237 MRSEAADRRQELVECVANADETLGEMFLEERVPTVLDLKAAVRRATVKRSFSPVLVGSALKNKGV 301

Human   326 QPLLDAVLEYLPNPSEVQNYAILNKEDDSKEKTKILMNSSRDNSHPFVGLAFKLEVGRFGQLTYV 390
            ||||||||||||||:|||||||||:|.:| |.:||||:|:||::.||||||||||.|||||||||
Zfish   302 QPLLDAVLEYLPNPTEVQNYAILNEEGES-EGSKILMDSTRDDTQPFVGLAFKLEAGRFGQLTYV 365

Human   391 RSYQGELKKGDTIYNTRTRKKVRLQRLARMHADMMEDVEEVYAGDICALFGIDCASGDTFTDKAN 455
            |.|||.|:|.|.|:|:||.::||:|||.|:|||.|||||..||||||||||||||||||||.:.|
Zfish   366 RVYQGCLRKTDYIHNSRTGRRVRVQRLVRLHADQMEDVEVAYAGDICALFGIDCASGDTFTARNN 430

Human   456 SGLSMESIHVPDPVISIAMKPSNKNDLEKFSKGIGRFTREDPTFKVYFDTENKETVISGMGELHL 520
            :.|||||||||:||||:|::||||||.:|.||||.|||||||||:|:||||:|||:|||||||||
Zfish   431 ANLSMESIHVPEPVISMAIRPSNKNDTDKLSKGISRFTREDPTFRVHFDTESKETIISGMGELHL 495

Human   521 EIYAQRLEREYGCPCITGKPKVAFRETITAPVPFDFTHKKQSGGAGQYGKVIGVLEPLDPEDYTK 585
            |||:||:||||.|||:.||||||||||:|:.|||::||||||||:||||||||||||||.|:|||
Zfish   496 EIYSQRMEREYSCPCVMGKPKVAFRETLTSAVPFEYTHKKQSGGSGQYGKVIGVLEPLDSENYTK 560

Human   586 LEFSDETFGSNIPKQFVPAVEKGFLDACEKGPLSGHKLSGLRFVLQDGAHHMVDSNEISFIRAGE 650
            :||||||.|:||||||||||||||.||||||||.|||:||:||||:|||||||||||||||||||
Zfish   561 VEFSDETVGTNIPKQFVPAVEKGFRDACEKGPLIGHKISGVRFVLEDGAHHMVDSNEISFIRAGE 625

Human   651 GALKQALANATLCILEPIMAVEVVAPNEFQGQVIAGINRRHGVITGQDGVEDYFTLYADVPLNDM 715
            ||:||||..||:.||||:|:||:||||||||.||||:|||||||:||||.:.|||||||:|||||
Zfish   626 GAVKQALEKATVVILEPVMSVEIVAPNEFQGAVIAGVNRRHGVISGQDGADGYFTLYADIPLNDM 690

Human   716 FGYSTELRSCTEGKGEYTMEYSRYQPCLPSTQEDVINKYLEATGQLPVKKGKAKN 770
            |||:|||||||||||||||||||||||..|.|||::||:||||||||.||.|.||
Zfish   691 FGYATELRSCTEGKGEYTMEYSRYQPCAASVQEDLVNKHLEATGQLPAKKSKWKN 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GFM1NP_001295093.1 FusA 39..754 CDD:440248 557/714 (78%)
gfm1NP_001073463.1 FusA 36..729 CDD:440248 556/712 (78%)

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