DRSC/TRiP Functional Genomics Resources

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Protein Alignment GFM1 and mef1

DIOPT Version :10

Sequence 1:NP_001295093.1 Gene:GFM1 / 85476 HGNCID:13780 Length:770 Species:Homo sapiens
Sequence 2:NP_595472.2 Gene:mef1 / 2539776 PomBaseID:SPBC1306.01C Length:770 Species:Schizosaccharomyces pombe


Alignment Length:734 Identity:394/734 - (53%)
Similarity:507/734 - (69%) Gaps:49/734 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    44 EKIRNIGISAHIDSGKTTLTERVLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGITIQSAATY 108
            ::||||||||||||||||.|||||||||||..:|||:|||.|||.||.|||||::|||||||||:
pombe    57 KQIRNIGISAHIDSGKTTFTERVLYYTGRIKDIHEVRGKDNVGAKMDFMELEREKGITIQSAATH 121

Human   109 TMW------------------KDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQT 155
            ..|                  |..||||||||||:|||||||||||||||||||||||.|||.||
pombe   122 CTWERTVDQIEANEKQKTDFEKSYNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQT 186

Human   156 MTVNRQMKRYNVPFLTFINKLDRMGSNPARALQQMRSKLNHNAAFMQIPMGLEGNFKGIVDLIEE 220
            :||:|||:|||||.::|:||:||||::|.:.:||:.:||...||.:|||:|.|...:|:||||:.
pombe   187 ITVDRQMRRYNVPRISFVNKMDRMGADPWKVIQQINTKLKIPAAAVQIPIGQEDKLEGVVDLIQM 251

Human   221 RAIYFDGDFGHFLRDFLPLLWNWDRRSGSQIVRYGEIPAELRAAATDHRQELIECVANSDEQLGE 285
            ||||..|.                  .|.:|....::|..|...|.:.|..|||.:|:.||::.:
pombe   252 RAIYNRGS------------------KGEKIEISQQVPENLIELAKEKRSALIEKLADLDEEIAD 298

Human   286 MFLEEKIPSISDLKLAIRRATLKRSFTPVFLGSALKNKGVQPLLDAVLEYLPNPSEVQNYAILNK 350
            :::.|:.|:...|..||||.||.|.||||.:||||.|.|||.:||||.:||||||||:|.| ||.
pombe   299 IYVMEEDPTPEQLMGAIRRTTLARKFTPVLMGSALSNVGVQSVLDAVCDYLPNPSEVENIA-LNA 362

Human   351 EDDSKEKTKILMNSSRDNSHPFVGLAFKLEVGRFGQLTYVRSYQGELKKGDTIYNTRTRKKVRLQ 415
            .|  .||...|:.||   ..|.|.||||||.||||||||:|.|||.||:|:.|||..:.||:::.
pombe   363 AD--SEKPVSLVPSS---EKPLVALAFKLEEGRFGQLTYLRIYQGTLKRGNYIYNVNSTKKIKVS 422

Human   416 RLARMHADMMEDVEEVYAGDICALFGIDCASGDTFTDKANSGLSMESIHVPDPVISIAMKPSNKN 480
            ||.|||::.||::|:|.||.|||||||:|||||||||.:.| .:|.|:.||:||||:::||.:| 
pombe   423 RLVRMHSNDMEEIEKVEAGGICALFGIECASGDTFTDGSVS-YTMTSMFVPEPVISLSLKPKSK- 485

Human   481 DLEKFSKGIGRFTREDPTFKVYFDTENKETVISGMGELHLEIYAQRLEREYGCPCITGKPKVAFR 545
            |...|||.:.||.||||||:|..|.|:|||:||||||||||:|.:|:.|||...|.||||:||||
pombe   486 DTTSFSKALNRFQREDPTFRVQLDNESKETIISGMGELHLEVYVERMRREYKVDCETGKPRVAFR 550

Human   546 ETITAPVPFDFTHKKQSGGAGQYGKVIGVLEPLD-PED----YTKLEFSDETFGSNIPKQFVPAV 605
            ||::..|||.:.|||||||||||.||.|.:|.:| .||    ....||.::..|..:|.|::||.
pombe   551 ETLSKKVPFSYLHKKQSGGAGQYAKVEGYIEYMDGVEDESGNVVDCEFINKVTGGTVPTQYIPAC 615

Human   606 EKGFLDACEKGPLSGHKLSGLRFVLQDGAHHMVDSNEISFIRAGEGALKQALANATLCILEPIMA 670
            ||.|.:|.:||.|.||.:...||||:|||:|.|||:|::|..|...|.:.|...|...:|||||.
pombe   616 EKAFYEALKKGFLIGHPIKNCRFVLEDGAYHPVDSSELAFRLATISAFRTAFLQANPMVLEPIMN 680

Human   671 VEVVAPNEFQGQVIAGINRRHGVITGQDGVEDYFTLYADVPLNDMFGYSTELRSCTEGKGEYTME 735
            |.:.||.|.||.||..:::|...|...|..||.|||.|:||||.||.||:::|:.|:||||::||
pombe   681 VSITAPVEHQGGVIGNLDKRKATIVDSDTDEDEFTLQAEVPLNSMFSYSSDIRALTKGKGEFSME 745

Human   736 YSRYQPCLPSTQEDVINKY 754
            :.:|.|.....|:::::.|
pombe   746 FLKYLPAPKYVQKELVDAY 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GFM1NP_001295093.1 FusA 39..754 CDD:440248 393/732 (54%)
mef1NP_595472.2 FusA 53..768 CDD:440248 394/734 (54%)

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