DRSC/TRiP Functional Genomics Resources

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Protein Alignment GFM1 and gfm1

DIOPT Version :10

Sequence 1:NP_001295093.1 Gene:GFM1 / 85476 HGNCID:13780 Length:770 Species:Homo sapiens
Sequence 2:XP_002933285.1 Gene:gfm1 / 100494046 XenbaseID:XB-GENE-983072 Length:748 Species:Xenopus tropicalis


Alignment Length:779 Identity:618/779 - (79%)
Similarity:681/779 - (87%) Gaps:40/779 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     1 MRLLGAAAVAALGRGRAPASLGWQ---------RKQVNWKACRWSSSGVIPNEKIRNIGISAHID 56
            ||||           |..:.||.|         .|.:....||:.|||::|||:|||||||||||
 Frog     1 MRLL-----------REASKLGSQALRYSGITRNKPLPLTFCRYCSSGIVPNERIRNIGISAHID 54

Human    57 SGKTTLTERVLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTMWKDVNINIIDT 121
            ||||||||||||||||||:||||||||||||||||||||||||||||||||||||||.|||||||
 Frog    55 SGKTTLTERVLYYTGRIAQMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTMWKDTNINIIDT 119

Human   122 PGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVNRQMKRYNVPFLTFINKLDRMGSNPARA 186
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||:||||.||
 Frog   120 PGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVNRQMKRYNVPFLTFINKLDRLGSNPNRA 184

Human   187 LQQMRSKLNHNAAFMQIPMGLEGNFKGIVDLIEERAIYFDGDFGHFLRDFLPLLWNWDRRSGSQI 251
            :||:||||||||||:|||:|:|..||||:||:||||:||||:||                   |.
 Frog   185 VQQLRSKLNHNAAFVQIPIGIESKFKGIIDLVEERAMYFDGEFG-------------------QT 230

Human   252 VRYGEIPAELRAAATDHRQELIECVANSDEQLGEMFLEEKIPSISDLKLAIRRATLKRSFTPVFL 316
            :||.:||||.||.|.|.||||||.||||||.|||||||||||::||||||||||||||.||||.:
 Frog   231 MRYEDIPAEFRAEAMDRRQELIESVANSDEILGEMFLEEKIPTVSDLKLAIRRATLKRLFTPVLV 295

Human   317 GSALKNKGVQPLLDAVLEYLPNPSEVQNYAILNKEDDSKEKTKILMNSSRDNSHPFVGLAFKLEV 381
            |||||||||||||:||||||||||||||:||||.| :|:|.|||||||.||:|.||||||||||.
 Frog   296 GSALKNKGVQPLLEAVLEYLPNPSEVQNFAILNHE-NSEEATKILMNSVRDSSQPFVGLAFKLEA 359

Human   382 GRFGQLTYVRSYQGELKKGDTIYNTRTRKKVRLQRLARMHADMMEDVEEVYAGDICALFGIDCAS 446
            ||||||||||.|||.|:|.|.|:||||.||||:|||.|:||||||||||.|||||||||||||||
 Frog   360 GRFGQLTYVRVYQGMLQKSDYIFNTRTGKKVRVQRLVRLHADMMEDVEEAYAGDICALFGIDCAS 424

Human   447 GDTFTDKANSGLSMESIHVPDPVISIAMKPSNKNDLEKFSKGIGRFTREDPTFKVYFDTENKETV 511
            |||||.|:|..||||||||||||||:||||:|||||:||||||.|||||||||:|:::.|:|||:
 Frog   425 GDTFTSKSNDNLSMESIHVPDPVISVAMKPTNKNDLDKFSKGISRFTREDPTFRVHYEVESKETI 489

Human   512 ISGMGELHLEIYAQRLEREYGCPCITGKPKVAFRETITAPVPFDFTHKKQSGGAGQYGKVIGVLE 576
            |||||||||||||||:||||.|||:.|||||||||||:..||||||||||||||||||||||.||
 Frog   490 ISGMGELHLEIYAQRMEREYACPCVMGKPKVAFRETISKTVPFDFTHKKQSGGAGQYGKVIGFLE 554

Human   577 PLDPEDYTKLEFSDETFGSNIPKQFVPAVEKGFLDACEKGPLSGHKLSGLRFVLQDGAHHMVDSN 641
            ||:.|:||||||.|:|.|:|:|||||||||:||.:|||||||:|||:|||||||:||||||||||
 Frog   555 PLEAENYTKLEFEDKTVGTNVPKQFVPAVERGFREACEKGPLTGHKISGLRFVLEDGAHHMVDSN 619

Human   642 EISFIRAGEGALKQALANATLCILEPIMAVEVVAPNEFQGQVIAGINRRHGVITGQDGVEDYFTL 706
            |||||||||||||||:.|||:|||||||:||||||:||||.||||||||||||.||||.|.||||
 Frog   620 EISFIRAGEGALKQAMENATVCILEPIMSVEVVAPSEFQGPVIAGINRRHGVIVGQDGSEGYFTL 684

Human   707 YADVPLNDMFGYSTELRSCTEGKGEYTMEYSRYQPCLPSTQEDVINKYLEATGQLPVKKGKAKN 770
            ||||||||||||::|||||||||||||||||||||||.||||::||||||||||||.||||||:
 Frog   685 YADVPLNDMFGYASELRSCTEGKGEYTMEYSRYQPCLASTQEELINKYLEATGQLPAKKGKAKS 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GFM1NP_001295093.1 FusA 39..754 CDD:440248 589/714 (82%)
gfm1XP_002933285.1 FusA 42..732 CDD:440248 586/709 (83%)

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