DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LBX2 and ftz

DIOPT Version :10

Sequence 1:NP_001269359.1 Gene:LBX2 / 85474 HGNCID:15525 Length:198 Species:Homo sapiens
Sequence 2:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster


Alignment Length:190 Identity:49/190 - (25%)
Similarity:70/190 - (36%) Gaps:45/190 - (23%)


- Green bases have known domain annotations that are detailed below.


Human     7 PRTPRTLLSIADILAPRMVPRAP-SAPQL-----PESGPGPTSPLCALEELTSKTFRGLDARALQ 65
            |::....|...|...|  .|..| |.|.|     |...||..|.....:|:..:..         
  Fly   176 PQSQTQKLKNGDFATP--PPTTPTSLPPLEGISTPPQSPGEKSSSAVSQEINHRIV--------- 229

Human    66 PSEGRAGPDALGPGPFG------------RKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGL 118
                 ..|:  |.|.|.            :..:::|..:|..|.||||:.|.|.:|:....|..:
  Fly   230 -----TAPN--GAGDFNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRIDI 287

Human   119 ATRLGLANAQVVTWFQNRRAKLKRDVEEMRADV------ASLRALSPEVLCSLALPEGAP 172
            |..|.|:..|:..||||||.|.|:|   ...|.      |...|:.|.:..:.....|||
  Fly   288 ANALSLSERQIKIWFQNRRMKSKKD---RTLDSSPEHCGAGYTAMLPPLEATSTATTGAP 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LBX2NP_001269359.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..46 9/27 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..89 4/37 (11%)
Homeodomain 86..142 CDD:459649 22/55 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..198 49/190 (26%)
ftzNP_477498.1 FTZ 1..248 CDD:397787 18/89 (20%)
Homeodomain 255..311 CDD:459649 22/55 (40%)
KLF1_2_4_N <321..404 CDD:425360 6/24 (25%)

Return to query results.
Submit another query.