DRSC/TRiP Functional Genomics Resources

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Protein Alignment LBX2 and cad

DIOPT Version :10

Sequence 1:NP_001269359.1 Gene:LBX2 / 85474 HGNCID:15525 Length:198 Species:Homo sapiens
Sequence 2:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster


Alignment Length:180 Identity:49/180 - (27%)
Similarity:71/180 - (39%) Gaps:43/180 - (23%)


- Green bases have known domain annotations that are detailed below.


Human    26 PRAPSAPQLPESGPGPTSPLCALEELTSKTFRGLDARALQPSEGRAGPDALGPGPFGRKRRKSRT 90
            |..|:.|| |:....|.     ||:|:..    |||      .|:.           |.:.|.|.
  Fly   259 PAYPAQPQ-PDLSSSPN-----LEDLSDL----LDA------SGKT-----------RTKDKYRV 296

Human    91 AFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRD-----------V 144
            .:|..|.||||:.:...:|:....:..||..|.|:..||..||||||||.::.           |
  Fly   297 VYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPNVMGV 361

Human   145 EEMRADVASL----RALSPEVLCSLALPEGAPDPGLCLGPAGPDSRPHLS 190
            ....||.:.|    ..|.|.:..|.:|.. :.:|...:........|||:
  Fly   362 GVQHADYSQLLDAKAKLEPGLHLSHSLAH-SMNPMAAMNIPAMRLHPHLA 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LBX2NP_001269359.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..46 6/19 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..89 3/25 (12%)
Homeodomain 86..142 CDD:459649 23/55 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..198 4/18 (22%)
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 23/54 (43%)

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