DRSC/TRiP Functional Genomics Resources

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Protein Alignment BI2 and CYTB

DIOPT Version :10

Sequence 1:NP_009318.1 Gene:BI2 / 854604 SGDID:S000007271 Length:423 Species:Saccharomyces cerevisiae
Sequence 2:YP_009047277.1 Gene:CYTB / 19893556 FlyBaseID:FBgn0013678 Length:378 Species:Drosophila melanogaster


Alignment Length:413 Identity:127/413 - (30%)
Similarity:204/413 - (49%) Gaps:72/413 - (17%)


- Green bases have known domain annotations that are detailed below.


Yeast     4 RKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFMAMHYSSNIELAFSSVEHI 68
            |.|:....:.|:.::|.|.|.:|:.|||.||||||||:|||:||:|:||||:::|.|||.||.||
  Fly     6 RNSHPLFKIANNALVDLPAPINISSWWNFGSLLGLCLIIQILTGLFLAMHYTADINLAFYSVNHI 70

Yeast    69 MRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYR-SPRVTLWNVGVIIFILTIATAFLGY 132
            .|||:.|::||.||||||||||:.:::|:.:|:|||||: :|   .|.:||||..|.:.|||:||
  Fly    71 CRDVNYGWLLRTLHANGASFFFICIYLHVGRGIYYGSYKFTP---TWLIGVIILFLVMGTAFMGY 132

Yeast   133 CCVYGQMSHWGNMNIASNMFNMMKTIYMMMLMLLIYIFYTIMMRQMMKTKEYTMLIKSMDYINKN 197
            ...:||||.||    |:.:.|::..|..:.:.|:.:::....:.....|:.:|... .:.:|...
  Fly   133 VLPWGQMSFWG----ATVITNLLSAIPYLGMDLVQWLWGGFAVDNATLTRFFTFHF-ILPFIVLA 192

Yeast   198 KYMINLNMTNKKDMNNNIGPLNMNILSIIYGSMLGDGHAEKRKGGKGTRIVFQQEYCNINYLYYL 262
            ..||:|...::...||.|| ||.||..|.:...                ..|:.....|..::.|
  Fly   193 MTMIHLLFLHQTGSNNPIG-LNSNIDKIPFHPY----------------FTFKDIVGFIVMIFIL 240

Yeast   263 HSLLANLGYCNTNLPLIKTRLGKKGKIRQYLKFNTWTYDSFNMIYSEWYIKNMSGKGNIKVIPKS 327
            .||:           ||...|  .|....::..|.....:.  |..|||.  :.....::.||..
  Fly   241 ISLV-----------LISPNL--LGDPDNFIPANPLVTPAH--IQPEWYF--LFAYAILRSIPNK 288

Yeast   328 LDNYLT-PLALAIWIMDDGCKLGK--GLKFTTNCFSYKDVQYLTYLLHNKYNIKSTITKGNKENT 389
            |...:. .|::||.::.....|.|  |::|    :....|.:.:.|:        |:        
  Fly   289 LGGVIALVLSIAILMILPFYNLSKFRGIQF----YPINQVMFWSMLV--------TV-------- 333

Yeast   390 QFVIYVWKESMPILTKIVSPYII 412
              ::..|..:.|    :..||::
  Fly   334 --ILLTWIGARP----VEEPYVL 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BI2NP_009318.1 CYTB 3..>143 CDD:177239 75/139 (54%)
LAGLIDADG_2 223..403 CDD:427174 30/182 (16%)
CYTBYP_009047277.1 CYTB 12..367 CDD:214440 125/407 (31%)

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