DRSC/TRiP Functional Genomics Resources

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Protein Alignment BI2 and CYTB

DIOPT Version :9

Sequence 1:NP_009318.1 Gene:BI2 / 854604 SGDID:S000007271 Length:423 Species:Saccharomyces cerevisiae
Sequence 2:YP_009047277.1 Gene:CYTB / 19893556 FlyBaseID:FBgn0013678 Length:378 Species:Drosophila melanogaster


Alignment Length:413 Identity:127/413 - (30%)
Similarity:204/413 - (49%) Gaps:72/413 - (17%)


- Green bases have known domain annotations that are detailed below.


Yeast     4 RKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFMAMHYSSNIELAFSSVEHI 68
            |.|:....:.|:.::|.|.|.:|:.|||.||||||||:|||:||:|:||||:::|.|||.||.||
  Fly     6 RNSHPLFKIANNALVDLPAPINISSWWNFGSLLGLCLIIQILTGLFLAMHYTADINLAFYSVNHI 70

Yeast    69 MRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYR-SPRVTLWNVGVIIFILTIATAFLGY 132
            .|||:.|::||.||||||||||:.:::|:.:|:|||||: :|   .|.:||||..|.:.|||:||
  Fly    71 CRDVNYGWLLRTLHANGASFFFICIYLHVGRGIYYGSYKFTP---TWLIGVIILFLVMGTAFMGY 132

Yeast   133 CCVYGQMSHWGNMNIASNMFNMMKTIYMMMLMLLIYIFYTIMMRQMMKTKEYTMLIKSMDYINKN 197
            ...:||||.||    |:.:.|::..|..:.:.|:.:::....:.....|:.:|... .:.:|...
  Fly   133 VLPWGQMSFWG----ATVITNLLSAIPYLGMDLVQWLWGGFAVDNATLTRFFTFHF-ILPFIVLA 192

Yeast   198 KYMINLNMTNKKDMNNNIGPLNMNILSIIYGSMLGDGHAEKRKGGKGTRIVFQQEYCNINYLYYL 262
            ..||:|...::...||.|| ||.||..|.:...                ..|:.....|..::.|
  Fly   193 MTMIHLLFLHQTGSNNPIG-LNSNIDKIPFHPY----------------FTFKDIVGFIVMIFIL 240

Yeast   263 HSLLANLGYCNTNLPLIKTRLGKKGKIRQYLKFNTWTYDSFNMIYSEWYIKNMSGKGNIKVIPKS 327
            .||:           ||...|  .|....::..|.....:.  |..|||.  :.....::.||..
  Fly   241 ISLV-----------LISPNL--LGDPDNFIPANPLVTPAH--IQPEWYF--LFAYAILRSIPNK 288

Yeast   328 LDNYLT-PLALAIWIMDDGCKLGK--GLKFTTNCFSYKDVQYLTYLLHNKYNIKSTITKGNKENT 389
            |...:. .|::||.::.....|.|  |::|    :....|.:.:.|:        |:        
  Fly   289 LGGVIALVLSIAILMILPFYNLSKFRGIQF----YPINQVMFWSMLV--------TV-------- 333

Yeast   390 QFVIYVWKESMPILTKIVSPYII 412
              ::..|..:.|    :..||::
  Fly   334 --ILLTWIGARP----VEEPYVL 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BI2NP_009318.1 CYTB 3..>143 CDD:177239 75/139 (54%)
LAGLIDADG_2 223..403 CDD:397327 30/182 (16%)
CYTBYP_009047277.1 CYTB 12..367 CDD:214440 125/407 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346803
Domainoid 1 1.000 248 1.000 Domainoid score I350
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19271
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1779
TreeFam 00.000 Not matched by this tool.
54.940

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