DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP3B1 and ap3b1

DIOPT Version :10

Sequence 1:NP_003655.3 Gene:AP3B1 / 8546 HGNCID:566 Length:1094 Species:Homo sapiens
Sequence 2:XP_012822818.3 Gene:ap3b1 / 100493180 XenbaseID:XB-GENE-987208 Length:1097 Species:Xenopus tropicalis


Alignment Length:1110 Identity:830/1110 - (74%)
Similarity:929/1110 - (83%) Gaps:40/1110 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     2 SSNSFPYN-EQSGGG--EATELGQEATSTISPSG-----AFGLFSSDLKKNEDLKQMLESNKDSA 58
            :|.:..|| ..||||  |:|||.|||    ||||     .|||||:||||||||||||||||||:
 Frog    11 ASTALTYNHNHSGGGGAESTELAQEA----SPSGNSTPSVFGLFSTDLKKNEDLKQMLESNKDSS 71

Human    59 KLDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRA 123
            ||:|||||||||:.|||||||||||||||||||:|||||||||||||||||||||||||:||||.
 Frog    72 KLEAMKRIVGMISDGKNASELFPAVVKNVASKNLEIKKLVYVYLVRYAEEQQDLALLSIATFQRG 136

Human   124 LKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLDPEQKEML 188
            |||||||||||||||||||||||||||||||||||:|||||||||.||||||||||||||||:||
 Frog   137 LKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAAADLSPYVRKTAAHAIQKLYSLDPEQKDML 201

Human   189 IEVIEKLLKDKSTLVAGSVVMAFEEVCPDRIDLIHKNYRKLCNLLVDVEEWGQVVIIHMLTRYAR 253
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   202 IEVIEKLLKDKSTLVAGSVVMAFEEVCPDRIDLIHKNYRKLCNLLVDVEEWGQVVIIHMLTRYAR 266

Human   254 TQFVSPW-KEGDELEDNGKNFYESDDDQKEKTDKKKKPYTMDPDHRLLIRNTKPLLQSRNAAVVM 317
            .|||||| :|||..|...::|||| |::|:....:|:||.||||||||:||||||||||||||||
 Frog   267 MQFVSPWVEEGDSGEMTTQSFYES-DEEKDADTNQKRPYVMDPDHRLLLRNTKPLLQSRNAAVVM 330

Human   318 AVAQLYWHISPKSEAGIISKSLVRLLRSNREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDP 382
            ||||||||::||||...::|||:|||||:|||||||||||||:||||||:|||||||||:|||||
 Frog   331 AVAQLYWHLAPKSETSTVAKSLIRLLRSHREVQYIVLQNIATISIQRKGLFEPYLKSFYIRSTDP 395

Human   383 TMIKTLKLEILTNLANEANISTLLREFQTYVKSQDKQFAAATIQTIGRCATNILEVTDTCLNGLV 447
            ||||||||||:||||||||:|||||||||||:||||||||||||.||||||||..||||||||||
 Frog   396 TMIKTLKLEIMTNLANEANVSTLLREFQTYVRSQDKQFAAATIQAIGRCATNISAVTDTCLNGLV 460

Human   448 CLLSNRDEIVVAESVVVIKKLLQMQPAQHGEIIKHMAKLLDSITVPVARASILWLIGENCERVPK 512
            .||||||::||||||||||||||.|.:.|.:||:|||||.|.||||:|||||||||||.||||||
 Frog   461 LLLSNRDDVVVAESVVVIKKLLQTQTSHHSDIIRHMAKLFDKITVPMARASILWLIGEYCERVPK 525

Human   513 IAPDVLRKMAKSFTSEDDLVKLQILNLGAKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTRFI 577
            ||||||||.|||||:|||||||||:||..||:||||||||||.|||||||||||||||||||||:
 Frog   526 IAPDVLRKTAKSFTNEDDLVKLQIINLAVKLFLTNSKQTKLLAQYILNLGKYDQNYDIRDRTRFV 590

Human   578 RQLIVPNVKSGALSKYAKKIFLAQKPAPLLESPFKDRDHFQLGTLSHTLNIKATGYLELSNWPEV 642
            :||||||.||||||||||||||||||||:|:|.||||:|||||||||:||.||:||||||:|||:
 Frog   591 KQLIVPNEKSGALSKYAKKIFLAQKPAPVLKSSFKDREHFQLGTLSHSLNTKASGYLELSDWPEI 655

Human   643 APDPSVRNVEVIELAK-EWTPAGKAKQENSAKKFYSESEEEEDSSDSSSDSESESGSESGEQGES 706
            ||||||||||..|..| :.|....|..|.|:.||||:|||.|..|:.||::||||..:|..:.||
 Frog   656 APDPSVRNVEPSEPVKNKATKQEMANTEKSSDKFYSDSEEGEKESEESSENESESEEDSDNEKES 720

Human   707 GEEGDSNEDSSEDSSSEQDSESGRESGLENKRTAKRNSKAKGKSDSEDGEKENEKSKTSDSSNDE 771
                 |:|.|...||:|.:|||...|..|.|..         |.|||| ||:...:|:.|||...
 Frog   721 -----SSEQSDASSSAESESESDESSSKEQKNR---------KKDSED-EKKGTGTKSEDSSVYS 770

Human   772 SSSIEDSSSDSESESEPESESE---SRRVTKEKE---KKTKQDRTPLTKDVSLLDLDDFNPVSTP 830
            ..|.|.:||:|.||||.|||||   |::||..|:   |..||...|...:||||||||||   .|
 Frog   771 EDSSESASSESSSESEEESESEPETSKKVTNSKKTENKPVKQKEIPRKNEVSLLDLDDFN---MP 832

Human   831 VALPTPA-LSPSLMADLEGLHLSTSSSVISVSTPAFVPTKTHVLLHRMSGKGLAAHYFFPRQPCI 894
            .|:..|: |||||::|||||.||:||.||:|.||:|||:|||.||||||||||||.|.||||.||
 Frog   833 AAVAKPSILSPSLLSDLEGLSLSSSSPVINVCTPSFVPSKTHELLHRMSGKGLAAQYHFPRQQCI 897

Human   895 FGDKMVSIQITLNNTTDRKIENIHIGEKKLPIGMKMHVFNPIDSLEPEGSITVSMGIDFCDSTQT 959
            ||.:||::|||.|||||::||:|||.|||:..|:|||.||.||.|||||||||||||||||||||
 Frog   898 FGAQMVTVQITFNNTTDKRIEDIHIEEKKMAAGVKMHAFNQIDYLEPEGSITVSMGIDFCDSTQT 962

Human   960 ASFQLCTKDDCFNVNIQPPVGELLLPVAMSEKDFKKEQGVLTGMNETSAVIIAAPQNFTPSVIFQ 1024
            ||||||||::.|:|.||||.|||||||::||.|||||||.||||||:||.|....:..||.:|.|
 Frog   963 ASFQLCTKENQFSVGIQPPPGELLLPVSLSEADFKKEQGKLTGMNESSATIAVNAEYSTPQIIGQ 1027

Human  1025 KVVNVANVGAVPSGQDNIHRFAAKTVHSGSLMLVTVELKEGSTAQLIINTEKTVIGSVLLRELKP 1089
            :.:..||:|.|.|||:||:||||||||||||||||||||.||.||||||||||||||||||||||
 Frog  1028 RFLQAANLGVVASGQNNIYRFAAKTVHSGSLMLVTVELKGGSAAQLIINTEKTVIGSVLLRELKP 1092

Human  1090 VLSQG 1094
            |||||
 Frog  1093 VLSQG 1097

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP3B1NP_003655.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 15/31 (48%)
Adaptin_N 46..581 CDD:396262 462/535 (86%)
HEAT repeat 116..144 CDD:293787 25/27 (93%)
HEAT repeat 150..180 CDD:293787 27/29 (93%)
HEAT repeat 188..213 CDD:293787 24/24 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 268..292 8/23 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 662..811 65/154 (42%)
SEEEED <731..>764 CDD:434218 10/32 (31%)
AP3B1_C 813..958 CDD:464319 103/145 (71%)
ap3b1XP_012822818.3 Adaptin_N 59..594 CDD:396262 462/535 (86%)
HEAT repeat 129..157 CDD:293787 25/27 (93%)
HEAT repeat 163..193 CDD:293787 27/29 (93%)
HEAT repeat 201..226 CDD:293787 24/24 (100%)
AP3B1_C 817..961 CDD:464319 103/146 (71%)

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