DRSC/TRiP Functional Genomics Resources

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Protein Alignment LRRCC1 and dtr

DIOPT Version :9

Sequence 1:XP_016869409.1 Gene:LRRCC1 / 85444 HGNCID:29373 Length:1046 Species:Homo sapiens
Sequence 2:NP_724335.2 Gene:dtr / 318856 FlyBaseID:FBgn0023090 Length:1483 Species:Drosophila melanogaster


Alignment Length:1228 Identity:258/1228 - (21%)
Similarity:457/1228 - (37%) Gaps:348/1228 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    25 DVCFMD-KGLQSISELSLDSTLHAVNLHCNNISKIEAIDHIWNLQHLDLSSNQISRIEGLNTLTK 88
            ||.::. :|.|.|..|...:.|..:.|.||.||:|:.::.:..|:.|.|.:|.|::||.|:...:
  Fly    37 DVLYLHYQGFQCIESLEEYTELKCLWLECNAISEIQGLEKLSKLKCLFLQNNLITKIENLDPCRE 101

Human    89 LCTLNLSCNLITKVE--GLEELINLTRLNVSYNHIDDLSGLIPLHGIKHKLRYIDLHSNRIDS-- 149
            |.|||||.|.|.|::  |...|..|..|.:|.|::.|...|..|...| .|..:||.:||||.  
  Fly   102 LDTLNLSSNHIRKIQNIGTNVLPVLNTLTISSNYLKDSESLSDLIQCK-TLSVLDLSNNRIDDIL 165

Human   150 IHHLLQCMVGLHFLTNLILEKDGDDNPVCRLPGTSLNTVTLPSELRGYRAVILQTLPQLRILDCK 214
            |..:.:.|:.|..   |:|:    .|||.             |.|..||..::....:|..||.:
  Fly   166 IVKIFEQMLNLKV---LVLQ----GNPVV-------------SRLPQYRKTLILACKELTYLDSR 210

Human   215 NIF----------------GEPVNLTEINSSQLQCLEGLLDNLVSSDSPLNISEDEIIDRMPVIT 263
            .:|                ||.......|.::.:.....::..:               ||....
  Fly   211 PVFPRDRACAEAWKRDGYEGERKENNRWNRAERRKTRESINCTI---------------RMRNSH 260

Human   264 APIDELVPLEQFASTPSDAVLTSFMSVCQSSEPEKNNHEN----DLQNEIKLQKLDDQILQLLNE 324
            .|.|:..||.:.:.:..|        .|..:..:|...||    ||..|:..:       |.::|
  Fly   261 RPPDQQDPLLRSSDSEDD--------TCAETARKKVALENGCVDDLWEEVSGE-------QPISE 310

Human   325 TSNSIDNVLEKDPRPKRDTDITSESD------YGNRKECNRKVPRRSKIPYDAKTIQTIKHHNKN 383
            ...:..:.||       |.|.||..|      ..||    |.:..|..:.|:.: :..:|..|.:
  Fly   311 DGTNSSSSLE-------DNDGTSSQDDLIAEKLSNR----RTLEGRPTVLYETE-VSNVKSANND 363

Human   384 YNSFVSCNRKMKPPYLKELYVS-------------SSLANC----PMLQESE-KPKTEIIKVD-- 428
            .|.|.....|.....:::..|:             .|..||    |:::|:: ....||..||  
  Fly   364 INIFEEGVGKASQIIIEDKPVTKIKLINEPSCMNDKSAMNCTSMGPVVKENDFDEDAEIKNVDDM 428

Human   429 -------QSHSEDNTYQSLVEQLDQEREKRWRAEQAENKLMDYIDEL------HKHANEKEDIHS 480
                   :|:.:.|:......:|.|:.::...|.:.:.:..::.:||      .|..||..||.:
  Fly   429 VPCQNLIKSNEDINSEFGFSSKLKQDFDQTCTALRNDAECKEFDEELTIKESESKPFNEMYDIFA 493

Human   481 LALLTTDRLKEII-----------------FRERN---SKGQLEVMVHKLQNEIKKLTVELMKAK 525
               ...|:|.|.:                 |.|:|   |..:.::|::.|....:|..:|    |
  Fly   494 ---AEDDKLNETLDLNLNETTCPHHVHDNFFSEQNKMPSFYEEDIMINLLPKTKEKTLLE----K 551

Human   526 D-----------------QQEDHLKHLRTLEKTL-----------------EKMERQ-------- 548
            |                 |.|:.|..||...:.|                 |.:..|        
  Fly   552 DSIIENEKCAHDLDEMGRQMEEDLAELRQSTQNLIGISIDETARTDSETDEEDLIAQQDPYSPLL 616

Human   549 KRQQQAAQIRLIQEVELKA---SAADREIYLLRTSLHREREQAQQLHQLLALKEQEHRKELETRE 610
            |:|.:..:::::...|.||   |.:||.|     :|..|.:|..:..||.|....:..:.:..|.
  Fly   617 KQQFKDRRMKIMLTEETKAQEESLSDRNI-----ALSNESDQDDKQDQLFAKILDDATENIPKRI 676

Human   611 FFTDADFQDALAKEIAKEEKKHEQMIKEYQEKIDVLSQQYMDLENEFRIALTVEARRFQDVKDGF 675
            |.|..   |||:....:||...:..:.|.:|.        ...|:.|:.::| .:..|:...:..
  Fly   677 FGTGC---DALSSVWPQEECLLQLTLPENKES--------PAQEDTFKKSIT-NSTSFEKANEIC 729

Human   676 ENVATELAKSKHALIWAQRKENESSSLIKDLTCMVK---EQKTKLAEVSKLKQETAANLQNQINT 737
            ..:..::|:.:.||          ..|:.||...:.   :..||:    |.::.|:.|..:.::.
  Fly   730 VRMDQKMAEEEEAL----------GKLLHDLEGEINNVYDINTKV----KYEENTSTNESDAVSI 780

Human   738 LEILIEDDKQKSIQIELLKHEKVQLISELAAKESLIFGLRTERKVWGHELAQQGSSLAQNRGKLE 802
            ...|::|........|:|.|||         .:|..|||....:.:.:....:...|.....:..
  Fly   781 CTSLLDDIIVGLTFDEVLCHEK---------PKSFEFGLIESDEEFSYSFEPKLEKLVPPALEDP 836

Human   803 AQIESLSRENECLRKTNESDSDALRIKCKII-----DDQTETIRKLKDCLQEKDEHIKRLQEKIT 862
            |:.:||   .|||...::..|.....|..::     ....|.||..::.|:.|:         ::
  Fly   837 ARGKSL---RECLDTFSDFVSSMADPKLPVMLGRNPTSGVEKIRAAQELLKTKN---------LS 889

Human   863 EIEKCTQEQLDEKSSQLDEVLEKLERH---------NERKEKLKQQLKGKEVELEEIRKAYSTLN 918
            ::.|.|.|.|   :||:.:.:||.:|.         |:| :|....|:..|..|..::|      
  Fly   890 DLYKDTAESL---NSQVAKEIEKRKRRVAASATRCFNQR-DKYDDTLELVENRLMIVKK------ 944

Human   919 RKWHDKGE---------LLCHLE---------------------TQVKEVKEKFENKEKKLKAER 953
                |.|:         |:...|                     |:.::.||..  ....|...:
  Fly   945 ----DSGDLEELPPPPPLISDTESEDDNPTEDNYTPGNEVHRHGTKTQDSKEHL--MSNLLNQNQ 1003

Human   954 DKSIELQKN-----------AMEKLHSMDDAFKRQVDAIVEAHQAEIAQLA-------NEKQKCI 1000
            |..||.:||           ||....::|..|.:::| :.:.:.:|.::.|       ||.|..:
  Fly  1004 DDIIEGKKNDSAEDEFYSLEAMTTFGNLDAEFFQKLD-LQKVNASEDSEPAINCMRSYNELQAYM 1067

Human  1001 DSANLKVHQIEKEMRELLEETC------------KNKKTMEAK--IKQLAFALNEIQQ 1044
            .|.:|.. |:..|..|:|:..|            :|.|..|..  :|::...:.|.::
  Fly  1068 KSGSLNT-QLNSEEAEMLQTMCSRVASDVDKPKSQNSKEEEEDDLLKKMVLRMKEYEE 1124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LRRCC1XP_016869409.1 None
dtrNP_724335.2 leucine-rich repeat 38..57 CDD:275380 5/18 (28%)
LRR_8 56..112 CDD:290566 22/55 (40%)
LRR_4 56..98 CDD:289563 15/41 (37%)
LRR_RI 58..>184 CDD:238064 46/133 (35%)
leucine-rich repeat 58..79 CDD:275380 7/20 (35%)
leucine-rich repeat 80..101 CDD:275380 8/20 (40%)
LRR_8 100..161 CDD:290566 23/61 (38%)
leucine-rich repeat 102..125 CDD:275380 11/22 (50%)
leucine-rich repeat 126..147 CDD:275380 7/20 (35%)
leucine-rich repeat 151..175 CDD:275380 9/23 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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