DRSC/TRiP Functional Genomics Resources

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Protein Alignment APOL1 and Apol2

DIOPT Version :10

Sequence 1:NP_663318.1 Gene:APOL1 / 8542 HGNCID:618 Length:414 Species:Homo sapiens
Sequence 2:XP_006242004.3 Gene:Apol2 / 315111 RGDID:1309591 Length:405 Species:Rattus norvegicus


Alignment Length:356 Identity:144/356 - (40%)
Similarity:209/356 - (58%) Gaps:18/356 - (5%)


- Green bases have known domain annotations that are detailed below.


Human    59 DTGDPQSKPLGDWAAGTMDPESSIFIEDAIKYFKEKVSTQNLLLLLTDNEAWNGFVAAAELPRNE 123
            ||.||..        |...|.|..|||:|.:|.:......:|.||||::.||..|||.|||.|.:
  Rat    58 DTMDPSD--------GEDSPASRTFIEEATEYLQHTSGRDDLKLLLTEDGAWEAFVAEAELSRAD 114

Human   124 ADELRKALDNLARQMIMKDKN--WHDKGQQYRNWFLKEFPRLKSELEDNIRRLRALADGVQKVHK 186
            ||.||.||:.|...|..:|:|  .||.....|  |:..||::|.|||.::|:||.|||.|.|||:
  Rat   115 ADTLRDALNALTANMAEEDQNRLQHDLQDVER--FIDVFPQVKLELERHVRKLRTLADKVDKVHR 177

Human   187 GTTIANVVSGSLSISSGILTLVGMGLAPFTEGGSLVLLEPGMELGITAALTGITSSTMDYGKKWW 251
            ..||:.||:||.|..||:|||:|:.|.|.|.|.|||||..||.||..||:|.:::..:||..|..
  Rat   178 DCTISKVVAGSTSTVSGVLTLLGLALVPVTAGVSLVLLATGMGLGAAAAVTSVSTGIVDYTSKSS 242

Human   252 TQAQAHDLVIKSLDKLKEVREFLGENISNFLSLAGNTYQLTRGIGKDIRALRRARANLQSVPHAS 316
            .|.:|..||..|:.|:|...|.:..:.....||:.:..::.|.|.:.:.|::..:||    |..:
  Rat   243 AQTEASHLVSTSMVKVKMAAEAVVYSGPQVFSLSESCCRVLRCIEQSVYAIKLTKAN----PALA 303

Human   317 ASRPRV--TEPISAESGEQVERVNEPSILEMSRGVKLTDVAPVSFFLVLDVVYLVYESKHLHEGA 379
            ||..|:  ...|||:|.:.|::..:.:.|.|||..::..:|.....|:.||:.||.|||:|::||
  Rat   304 ASVKRLMTVGSISAQSDKHVKKAFKGTALAMSRRTRIMGIATAGVSLIGDVISLVKESKNLYKGA 368

Human   380 KSETAEELKKVAQELEEKLNILNNNYKILQA 410
            |:::||||::.|:||||||.:|...|..||:
  Rat   369 KAKSAEELRQQARELEEKLEVLVQIYDGLQS 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APOL1NP_663318.1 ApoL 104..403 CDD:461657 126/302 (42%)
Apol2XP_006242004.3 None

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