DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment APOL1 and Apol8

DIOPT Version :10

Sequence 1:NP_663318.1 Gene:APOL1 / 8542 HGNCID:618 Length:414 Species:Homo sapiens
Sequence 2:XP_006520997.3 Gene:Apol8 / 239552 MGIID:2444921 Length:439 Species:Mus musculus


Alignment Length:343 Identity:138/343 - (40%)
Similarity:203/343 - (59%) Gaps:14/343 - (4%)


- Green bases have known domain annotations that are detailed below.


Human    75 TMDPE-------SSIFIEDAIKYFKEKVSTQNLLLLLTDNEAWNGFVAAAELPRNEADELRKALD 132
            ||||.       ...|||:|.:|.:.....::|.||||::.||..|||.|||.|.:||.||.||.
Mouse   100 TMDPSDCEDAPGDRTFIEEAAEYLQHTSGREDLRLLLTEDGAWEAFVAEAELSRADADTLRDALH 164

Human   133 NLARQMIMKDKNWHDKGQQYRNWFLKEFPRLKSELEDNIRRLRALADGVQKVHKGTTIANVVSGS 197
            .|...:.::|:....:..|....|:..||::|.|||.:|.:||.|||.|.|||:..||:.:|:||
Mouse   165 ALTANLAVEDQERLQRDLQDMERFMDAFPQVKLELEGHIGKLRTLADKVDKVHRDCTISKLVAGS 229

Human   198 LSISSGILTLVGMGLAPFTEGGSLVLLEPGMELGITAALTGITSSTMDYGKKWWTQAQAHDLVIK 262
            .|..||||||:|:.|.|.|.|.|||||..||.||..||:|.::|..:||..:...:.:|..||..
Mouse   230 TSTVSGILTLLGLTLVPVTAGISLVLLATGMGLGAAAAVTSVSSGIVDYTSRSLAKTEASHLVST 294

Human   263 SLDKLKEVREFLGENISNFLSLAGNTYQLTRGIGKDIRALRRARANLQSVPHASASRPRVTEPIS 327
            .:.|:|.|.:.:..:....|||:.|..::.|.|.:.|.|::..:||    |..:||....|   |
Mouse   295 GMAKVKMVADAVVHSGPQVLSLSENCCRVLRCIEQSIYAIKLTKAN----PALAASAMGST---S 352

Human   328 AESGEQVERVNEPSILEMSRGVKLTDVAPVSFFLVLDVVYLVYESKHLHEGAKSETAEELKKVAQ 392
            |:||:.|::..:.:.|.:||..::..:|.....||.||:.||.:||:||:|.|:::||||::.|:
Mouse   353 AQSGKHVKKAFKGTALAISRRARIMGIATAGVSLVGDVISLVKQSKNLHKGTKAKSAEELRQQAR 417

Human   393 ELEEKLNILNNNYKILQA 410
            ||||||..|...|:.|||
Mouse   418 ELEEKLEALIQMYEGLQA 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APOL1NP_663318.1 ApoL 104..403 CDD:461657 122/298 (41%)
Apol8XP_006520997.3 ApoL 136..428 CDD:461657 122/298 (41%)

Return to query results.
Submit another query.