DRSC/TRiP Functional Genomics Resources

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Protein Alignment APOL1 and F07F6.8

DIOPT Version :10

Sequence 1:NP_663318.1 Gene:APOL1 / 8542 HGNCID:618 Length:414 Species:Homo sapiens
Sequence 2:NP_001379858.1 Gene:F07F6.8 / 173926 WormBaseID:WBGene00017220 Length:318 Species:Caenorhabditis elegans


Alignment Length:350 Identity:73/350 - (20%)
Similarity:131/350 - (37%) Gaps:122/350 - (34%)


- Green bases have known domain annotations that are detailed below.


Human    73 AGTMDPESSIFIEDAIKYFKEKVSTQNLLLLLTDNEAWNGFVAAAELPRNEADELRKALDNLARQ 137
            ||:...::.:.|.|         |.::||.                :||:.:.||.   :...|.
 Worm    10 AGSQSEDNGVPIYD---------SLESLLF----------------IPRSMSKELS---ETALRT 46

Human   138 MIMKDKNWHDKGQQYRNWFLKEFPRLKSELEDNIRRLRALADGVQKVHKGTTIANVVSGSLSISS 202
            ..:.|| |.:..::.                  :|::..:|:.:....||..|:..|..::.|:|
 Worm    47 QFLLDK-WSNNRRKI------------------VRQMEGIAEKLDNWEKGCAISTAVGSTVGIAS 92

Human   203 GILTLVGMGLAPFTEGGSLVLLEPGMELGITAALTGITSSTMDYGKKWWTQAQAHDL-------- 259
            ||..:.|:.|.|......|::   |...|::...||||       |.:.|:.|..::        
 Worm    93 GIAVIGGLILMPPVAIAGLIV---GTASGVSNLATGIT-------KFFHTKGQHKEVAAMIAEDG 147

Human   260 -----VIKSLDKLKE-VREFLGE-----------NISNFLS--LAGNTYQLTRGIGKDIRALRRA 305
                 ::||.::|.| ||:.:.:           :|.|.|.  ..|:...:| |||        .
 Worm   148 VLFEELLKSREELMEAVRKIVEDEEFFKHFKNDGDIENKLKTVFGGSVTGIT-GIG--------T 203

Human   306 RANLQSVPHASASRPRVTEPISAESGEQVERVNEPSILEMSRGVKLTDVAPVSFFLVLDVVYLVY 370
            |..:.|:...|:|                          :.:|| |..||.:.  :|||.|.|..
 Worm   204 RFAITSMGRLSSS--------------------------LVKGV-LHSVAVIG--IVLDSVTLAL 239

Human   371 ESKHLHEGAKSETAEELKKVAQELE 395
            .:|.|.||:.||....:.:.:.::|
 Worm   240 SAKTLGEGSVSELGSSILEASSKME 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APOL1NP_663318.1 ApoL 104..403 CDD:461657 65/318 (20%)
F07F6.8NP_001379858.1 ApoL <61..251 CDD:461657 55/237 (23%)

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