DRSC/TRiP Functional Genomics Resources

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Protein Alignment PPFIA3 and Liprin-alpha

DIOPT Version :10

Sequence 1:NP_003651.1 Gene:PPFIA3 / 8541 HGNCID:9247 Length:1194 Species:Homo sapiens
Sequence 2:NP_001260155.1 Gene:Liprin-alpha / 249072 FlyBaseID:FBgn0046704 Length:1214 Species:Drosophila melanogaster


Alignment Length:1276 Identity:609/1276 - (47%)
Similarity:789/1276 - (61%) Gaps:220/1276 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     1 MMCEVMPTISED--GRRGSALGPDEAGGELERLMVTMLTERERLLETLREAQDGLATAQLRLREL 63
            |||:||||||||  .:|.|....::|  ..|:|||:||.||::|:::|||||:.|...:.:||::
  Fly     4 MMCDVMPTISEDSISQRSSQFSGEDA--NFEQLMVSMLDERDKLMDSLREAQERLNETENKLRDV 66

Human    64 GHEKDSLQRQLSIALPQEFAALTKELNLCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHE 128
            ..|:||||||::..||||||.|||||...||.||||:|||.||||||||||||||||||||||||
  Fly    67 EKERDSLQRQINANLPQEFATLTKELTQARETLLERDEEIGELKAERNNTRLLLEHLECLVSRHE 131

Human   129 RSLRMTVVKRQAQSPGGVSSEVEVLKALKSLFEHHKALDEKVRERLRMALERVAVLEEELELSNQ 193
            ||||||||||||.:..|||||||||||||||||||||||||||||||:::|:..::||||.    
  Fly   132 RSLRMTVVKRQAAAQSGVSSEVEVLKALKSLFEHHKALDEKVRERLRLSIEKNNMMEEELS---- 192

Human   194 ETLNLREQLSRRRSGLEEPGKD-----GDGQTLA------NGL-----------GPGGDSNR--- 233
               :.:|:|::.::|:...|..     |...|.|      |||           |..|::|.   
  Fly   193 ---SAKEELAQYKAGVVPAGVGSGSGAGSAATTAGGGGAENGLKEKMAGVGGSGGVNGEANELND 254

Human   234 ---RTAELEEALERQRAEVCQLRERLAVLCRQMSQLEEELGTAHRELGKAEEANSKLQRDLKEAL 295
               :|.||:..:|:|.:|:.|.:.|::.|..::|:|||.:....:|..||::..:||||||:|.:
  Fly   255 YAAKTHELQTIIEKQTSELSQWQRRVSDLNNKISELEENMSRVQKEHCKAQDQCAKLQRDLRENV 319

Human   296 AQREDMEERITTLEKRYLSAQREATSLHDANDKLENELASKESLYRQSEEKSRQLAEWLDDAKQK 360
            ||:||.||||||||||||:||||:|||||.|:|||.||..||:..:..|||...:.|.|:.::||
  Fly   320 AQKEDQEERITTLEKRYLNAQRESTSLHDLNEKLEQELRHKEAQLKLHEEKIGAIEEKLELSEQK 384

Human   361 LQQTLQKAETLPEIEAQLAQRVAALNKAEERHGNFEERLRQLEAQLEEKNQELQRARQREKMNDD 425
            |   .|.|:..|::|.||..|:.||.||:||||:.|:|:|.||..|:||..|:.|..||.|||::
  Fly   385 L---AQHAKLQPDMEEQLKARMEALTKAQERHGSAEDRIRGLETNLDEKTNEVVRLNQRLKMNEE 446

Human   426 HNKRLSETVDKLLSESNERLQLHLKERMGALEEKNSLSEEIANMKKLQDELLLNKEQLLAEMERM 490
            ||.|||.||||||||||||||:||||||.||:|||:|::|:...:|:.:||...|.:::.|:.:.
  Fly   447 HNLRLSSTVDKLLSESNERLQVHLKERMHALDEKNALTQELEKARKVAEELHHEKSEIMKELSKT 511

Human   491 QMEIDQLRG-----------RPPSSYSRSL-PGSALELRYSQAPTLPSGA------HLDPYVAGS 537
            ::||:..:.           :...:.:||| |.|.::         ||||      |.. :...|
  Fly   512 RLEIENFKRQLLQQEIAYNIQQTEALTRSLSPSSVVD---------PSGAFSRSNSHAS-FETHS 566

Human   538 GRAGKRGRWSG----VKEEPSKDWERSAPAGSIPPPFPGELDGSDEEEAEGMFGA--ELLSPSGQ 596
            .|...:.|.|.    |:....::||:...|.............:|.::::.::.|  :::||||.
  Fly   567 LRRQSKQRLSEENALVRSMAEQEWEKLQQAAHAQQQAYELASAADCDDSDVLYAAATDMMSPSGH 631

Human   597 ADVQTLAIMLQEQLEAINKEIKLIQEEKETTEQRAEELESRVSS-SGLDSLGRYRSSCSLPPSLT 660
            .|.||||:||||||:|||.||:||||||::||.|||||||||.| ..::.|.|.||         
  Fly   632 TDAQTLAMMLQEQLDAINNEIRLIQEEKQSTEARAEELESRVGSLEHVNLLARGRS--------- 687

Human   661 TSTLASPSPPSSGHSTPRLAPPSPAREGTDKAN--HVPKEEAGAPRGE---GPAIPGDT------ 714
               :...|||.||.|||.    ||.|:...|.:  ::|...:.|.|.|   |.:..||:      
  Fly   688 ---MDRQSPPMSGRSTPN----SPQRDFMQKYHTLNLPVLSSDASREELHGGMSTTGDSSSGGAA 745

Human   715 PPPTPRSARLERMTQALA-----LQAGSL-----------EDGG------------PPRGSEGTP 751
            .|.|.||.||||:.||||     |:..|:           ..||            |.....|:.
  Fly   746 SPLTARSMRLERVAQALAHSQEELRRRSIGLNPNASVAPNHTGGHMPLSSHSYGLSPLSSRYGSQ 810

Human   752 DSLH-----------KAP--------------KKKSIKSSIGRLFGKKEKGRMGPPGRDSSSLAG 791
            :||.           :.|              |||.||||:||.|.||||.:    |...:...|
  Fly   811 ESLRHYNTMGSMSMLQTPTSGVSREAAAAAVQKKKGIKSSLGRFFSKKEKVK----GVKDTLPDG 871

Human   792 TPSDETLATDPLGLAK---------LTG---------PGDKDR-----RNKRKH----ELLEEAC 829
            :||..::....:||::         :||         .|.|..     |.|::|    :||.||.
  Fly   872 SPSMMSIGNLSIGLSEVDSNYDAMSMTGGMMPRIASSQGSKISSVDYGRQKKEHDYRNDLLGEAM 936

Human   830 RQGLPFAAWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKL 894
            :.|.|||.|:|||:|:||||||||||||||||||||||||||:.|||||||||||||||||||||
  Fly   937 KAGTPFALWNGPTIVAWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKL 1001

Human   895 RLAIQEMVSLTSPSAPASSRTSTGNVWMTHEEMESLTATTKPETKEISWEQILAYGDMNHEWVGN 959
            ||||||||||||||||.:|||:                              ||:|||||||:||
  Fly  1002 RLAIQEMVSLTSPSAPQTSRTT------------------------------LAFGDMNHEWIGN 1036

Human   960 DWLPSLGLPQYRSYFMESLVDARMLDHLNKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKDL 1024
            .|||.|||||||:.|||.||||||||||.||:|||||||||||||.||.|||..||||||||.:|
  Fly  1037 YWLPGLGLPQYRTTFMECLVDARMLDHLTKKDLRGQLKMVDSFHRTSLQYGISMLKRLNYDRTEL 1101

Human  1025 ERRREESQTQIRDVMVWSNERVMGWVSGLGLKEFATNLTESGVHGALLALDETFDYSDLALLLQI 1089
            |.||:.|:..:.||:|||||||:.||..:||||:|.||.||||||.|:||||.||.:.:.|.|||
  Fly  1102 EHRRKMSENGLCDVLVWSNERVIRWVGSIGLKEYANNLLESGVHGGLMALDEGFDANAMGLALQI 1166

Human  1090 PTQNAQARQLLEKEFSNLISLGTDRRLDED--SAKSFSRSP 1128
            |||||||||:|:.||:||:.:.||||.:.:  ||. .|.||
  Fly  1167 PTQNAQARQILDTEFNNLLQIATDRRPENEQRSASXCSYSP 1207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PPFIA3NP_003651.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 13/23 (57%)
Smc 39..>635 CDD:440809 307/647 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 202..233 11/52 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 525..583 14/67 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 624..819 82/282 (29%)
PHA03307 630..>836 CDD:223039 87/297 (29%)
SAM_liprin-alpha1,2,3,4_repeat1 835..905 CDD:188961 63/69 (91%)
SAM_liprin-alpha1,2,3,4_repeat2 952..1017 CDD:188964 52/64 (81%)
SAM_liprin-alpha1,2,3,4_repeat3 1037..1108 CDD:188967 48/70 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1157..1194
Liprin-alphaNP_001260155.1 SMC_N <37..408 CDD:481474 198/380 (52%)
Smc <255..>526 CDD:440809 133/273 (49%)
SAM_liprin-alpha1,2,3,4_repeat1 942..1012 CDD:188961 63/69 (91%)
SAM_liprin-alpha1,2,3,4_repeat2 1029..1094 CDD:188964 52/64 (81%)
SAM_liprin-alpha1,2,3,4_repeat3 1114..1185 CDD:188967 48/70 (69%)
Blue background indicates that the domain is not in the aligned region.

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