DRSC/TRiP Functional Genomics Resources

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Protein Alignment TUL1 and rbx-1

DIOPT Version :9

Sequence 1:NP_012890.1 Gene:TUL1 / 853832 SGDID:S000001517 Length:758 Species:Saccharomyces cerevisiae
Sequence 2:NP_505496.1 Gene:rbx-1 / 179358 WormBaseID:WBGene00004320 Length:110 Species:Caenorhabditis elegans


Alignment Length:56 Identity:16/56 - (28%)
Similarity:26/56 - (46%) Gaps:3/56 - (5%)


- Green bases have known domain annotations that are detailed below.


Yeast   698 DCAIC---MSDVPIYIEEIPETHKVDQHSYMVTPCNHVFHTSCLENWMNYKLQCPV 750
            :||||   :.|:.|..:........|:.:.....|||.||..|:..|:..:..||:
 Worm    43 NCAICRNHIMDLCIECQANQAAGLKDECTVAWGNCNHAFHFHCISRWLKTRQVCPL 98

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TUL1NP_012890.1 COG5540 320..758 CDD:227827 16/56 (29%)
rbx-1NP_505496.1 APC11 22..110 CDD:227521 16/56 (29%)
zf-rbx1 23..100 CDD:289448 16/56 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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